Gene Sden_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3399 
Symbol 
ID4019947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4055123 
End bp4056010 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content42% 
IMG OID637957452 
Producttransposase, IS4 
Protein accessionYP_564398 
Protein GI91794747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATT TAGTGGATGT ATTTTGTGAT GTCGATGATT TTTGTGCTGT ATTCATGCCG 
CAATGGAAAA AACAATGCGT AACAGATGGC ACGCGTAAGC GCCAACGTTC AAGCAGAATG
AGCATGAGCG AAATAATGAC TATTATCATA CTCTTCCATA CATCTCATCA TCGTGACTTC
AAAAATTACT ACACTGGATA TCTTGCTCGA TTTTTCAAGT CTGAGTTTCC CAACTTACTC
AGCTATACCC GTTTTATTGA GCTTATGCCG ACAGCTGTCG TGCCACTATG CAGCTATTTC
TCCAGCATCA GAAGTCTACC TACGGGGATT GAATTTGTCG ATTCGACCAG CGTAAAGGTT
TGCCACAATT TGCGAATTCC ACGACATAAA ACGTTATCTG GCCTTGCTCG CCGCGGAAAA
GGGACCATGG GGTGGTTCTA CGGGTTCAAG CTTCACCTCA TCGTTAACCA TAAGGGGGGG
ATTGTTGCCG CCAAAATTAC TCCAGCCAAT ACCCATGACA CTAAGCCTGT TTCAGGCATG
GTGGTGAATG CTATGGACAA GCTGTATGCG GATAAAGGCT ATATCAGTAA AGCGTTGGCA
AGCGAGCTAC TTGAGCAAGG CGTAACACTA GTAAACAATG TTCGCAAGAA CATGAAAAAG
AAGGTTTTAT CACTGTGGGA TAGGGCAATG CTTTCACGAA GATTTATTAT AGAAACGATC
AATGATCAGC TTAAGAATAT CTCACAAATC GAGCATTCGA GGCATAGAAG TGTGCATGGT
TTTATGCTGA ATATGATTGG CGGTTTAATT GCCTATCAAC TCAAAGAGAG TAAGCCACAA
CTTAATATCA CAGATGTCGA TTTCAATGCG ATTTCTGTTA TGGCTTAA
 
Protein sequence
MDNLVDVFCD VDDFCAVFMP QWKKQCVTDG TRKRQRSSRM SMSEIMTIII LFHTSHHRDF 
KNYYTGYLAR FFKSEFPNLL SYTRFIELMP TAVVPLCSYF SSIRSLPTGI EFVDSTSVKV
CHNLRIPRHK TLSGLARRGK GTMGWFYGFK LHLIVNHKGG IVAAKITPAN THDTKPVSGM
VVNAMDKLYA DKGYISKALA SELLEQGVTL VNNVRKNMKK KVLSLWDRAM LSRRFIIETI
NDQLKNISQI EHSRHRSVHG FMLNMIGGLI AYQLKESKPQ LNITDVDFNA ISVMA