Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3399 |
Symbol | |
ID | 4019947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4055123 |
End bp | 4056010 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637957452 |
Product | transposase, IS4 |
Protein accession | YP_564398 |
Protein GI | 91794747 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATT TAGTGGATGT ATTTTGTGAT GTCGATGATT TTTGTGCTGT ATTCATGCCG CAATGGAAAA AACAATGCGT AACAGATGGC ACGCGTAAGC GCCAACGTTC AAGCAGAATG AGCATGAGCG AAATAATGAC TATTATCATA CTCTTCCATA CATCTCATCA TCGTGACTTC AAAAATTACT ACACTGGATA TCTTGCTCGA TTTTTCAAGT CTGAGTTTCC CAACTTACTC AGCTATACCC GTTTTATTGA GCTTATGCCG ACAGCTGTCG TGCCACTATG CAGCTATTTC TCCAGCATCA GAAGTCTACC TACGGGGATT GAATTTGTCG ATTCGACCAG CGTAAAGGTT TGCCACAATT TGCGAATTCC ACGACATAAA ACGTTATCTG GCCTTGCTCG CCGCGGAAAA GGGACCATGG GGTGGTTCTA CGGGTTCAAG CTTCACCTCA TCGTTAACCA TAAGGGGGGG ATTGTTGCCG CCAAAATTAC TCCAGCCAAT ACCCATGACA CTAAGCCTGT TTCAGGCATG GTGGTGAATG CTATGGACAA GCTGTATGCG GATAAAGGCT ATATCAGTAA AGCGTTGGCA AGCGAGCTAC TTGAGCAAGG CGTAACACTA GTAAACAATG TTCGCAAGAA CATGAAAAAG AAGGTTTTAT CACTGTGGGA TAGGGCAATG CTTTCACGAA GATTTATTAT AGAAACGATC AATGATCAGC TTAAGAATAT CTCACAAATC GAGCATTCGA GGCATAGAAG TGTGCATGGT TTTATGCTGA ATATGATTGG CGGTTTAATT GCCTATCAAC TCAAAGAGAG TAAGCCACAA CTTAATATCA CAGATGTCGA TTTCAATGCG ATTTCTGTTA TGGCTTAA
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Protein sequence | MDNLVDVFCD VDDFCAVFMP QWKKQCVTDG TRKRQRSSRM SMSEIMTIII LFHTSHHRDF KNYYTGYLAR FFKSEFPNLL SYTRFIELMP TAVVPLCSYF SSIRSLPTGI EFVDSTSVKV CHNLRIPRHK TLSGLARRGK GTMGWFYGFK LHLIVNHKGG IVAAKITPAN THDTKPVSGM VVNAMDKLYA DKGYISKALA SELLEQGVTL VNNVRKNMKK KVLSLWDRAM LSRRFIIETI NDQLKNISQI EHSRHRSVHG FMLNMIGGLI AYQLKESKPQ LNITDVDFNA ISVMA
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