Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3393 |
Symbol | |
ID | 4019941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4048468 |
End bp | 4049211 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637957446 |
Product | hypothetical protein |
Protein accession | YP_564392 |
Protein GI | 91794741 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGC TGATTTATGA GCAACCTTTA AATGAAAAAG TACGCAGCTA TCTGCGTCTG GAATACTTAG CTCAGCAATT AGCCCAGGCG ATTGCCTCTG ATCAGCAGCA CAATGGCTTT TATCCCTTGT TTTCATTATG CGAAATGACA GATAGGTGTG ATTTTCGCTC TGAAGTGCTC AAAGATTTGG ATAGACAAAT TCTAGTGCTT AATAAATGGC AAGACTTGCC TCACGCCGAT ACCCAGCAGA TTAATCTATT GATAAATAGA CTCAATCAAG CCAAGGGGCC ACTACAGCAA CCAGAACGCA TTGGTGTCGC ACTCAAGCAA GATAAATTCA TTAGTGCACT TAGACAGAAG TTTTCCATGC TGGGCGCCTG TTGTAACTTT GATTTGCCCC AACTGCACTG CTGGCTCGCC AAATCTTGGA GTGATAGACA GCAAGATCTT ACCACTTGGC TAACTCACTA CCACCCACTG TTAGAGCCCA TTTGTTTATT GCTGGAATTG AGCCGCAGTA CGGCTGAGTT TGTCCCCGCC ACAGCTCACG CGGGCTTTTA TCAACAGGAT TGCACCCAAG TACTTTCTTT AGTGCGAGTT AAGCTCACTG CAGACAGTGA GTGCTACCCG ATCATTAGTG GTCACAGAAA TCGCTTCGCG ATCCATTTCG TTGATTTCCA GCAGCAGAAG CATTCTGACA AAAGCATTCA ATTCTTTCTG GCTACCTGTA GCGCCAACCA TTAA
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Protein sequence | MKPLIYEQPL NEKVRSYLRL EYLAQQLAQA IASDQQHNGF YPLFSLCEMT DRCDFRSEVL KDLDRQILVL NKWQDLPHAD TQQINLLINR LNQAKGPLQQ PERIGVALKQ DKFISALRQK FSMLGACCNF DLPQLHCWLA KSWSDRQQDL TTWLTHYHPL LEPICLLLEL SRSTAEFVPA TAHAGFYQQD CTQVLSLVRV KLTADSECYP IISGHRNRFA IHFVDFQQQK HSDKSIQFFL ATCSANH
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