| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3388 |
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| Symbol | |
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| ID | 4019936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4043125 |
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| End bp | 4043541 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957441 |
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| Product | methylation |
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| Protein accession | YP_564387 |
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| Protein GI | 91794736 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAA TTAAGCAAAT GAAAAACGCC AAAGGCTTCA CGTTAATCGA ATTAATGATC
GTAGTGGCGA TCATAGGTAT TTTAGCTGCA GTCGCACTGC CTGCATACCG TGATTACACT
GGTGCTGCTC ACGGTGGCGC GGCAATGAAA GGATTGGGCG CGTATACATC TAAAGCCGTA
ACCTGTGTGC AATCTGGTGT TGCCTGTGAC TCAATTAATC AAGACATGCT AAATGTTCCT
GAATTAGGTG CTGCAGTTGG TACTTTTGCG GAAGGAACTG GTGGTAGCAT TACTTTTAAT
GAAGGTAGTT GTTCAGTAAC TGCAGCCATT AACCCGACTG GGGCAGTAGA TTTCACAGCA
ACAACGACTG GGTCAGGTGC TACAGCAGCC CAGTGTCAAG ATGGTGCTGG GATCTAA
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| Protein sequence | MKSIKQMKNA KGFTLIELMI VVAIIGILAA VALPAYRDYT GAAHGGAAMK GLGAYTSKAV
TCVQSGVACD SINQDMLNVP ELGAAVGTFA EGTGGSITFN EGSCSVTAAI NPTGAVDFTA
TTTGSGATAA QCQDGAGI
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