| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3383 |
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| Symbol | aceE |
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| ID | 4019931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4035549 |
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| End bp | 4038209 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957436 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_564382 |
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| Protein GI | 91794731 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.771869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAC ATATGCTAAA AGATGTTGAT CCACAAGAAA CTAGCGAGTG GTTGTCTGCT
TTAGAATCTG TTGTACGCGA AGAAGGTGTG GAACGTGCTC AGTACTTACT TGAACAAGTA
CTAGATAAAG CTCGCTTAGA TGGCGTTGAT ATGCCGACTG GCGTGACTAC CAACTATGTT
AACACCATTG CCACCAAAGA TGAGCCAGCG TATCCAGGGG ATACCACATT AGAGCGCCGT
ATCCGTTCTA TCATACGTTG GAACGCAATC ATGATAGTGT TGCGCGCATC GAAAAAAGAT
TTAGATCTTG GCGGCCACAT GGCGTCTTAC CAATCTTCAG CCGCGTTTTA CGAAACCTGT
TTTAACCACT TTTTCCGCGC ACCTAATGAA AAAGACGGTG GCGATTTAGT CTATTATCAA
GGCCATATCT CCCCAGGTAT TTATGCTCGT GCCTTTGTTG AAGGTCGTTT AACGGCGGAT
CAATTAGATA ACTTCCGTCA GGAAGTGGAT GGAAAAGGCA TCCCTTCGTA TCCACACCCT
AAATTAATGC CTGAGTTTTG GCAGTTCCCA ACGGTATCTA TGGGCTTAGG TCCAATGTCG
GCCATTTATC AAGCGCGTTT CTTAAAATAC CTTGACGGTC GTGGCCTAAA AGATACTTCT
GCGCAGCGGG TTTACGCCTT CTTAGGTGAT GGCGAGATGG ACGAGCCAGA ATCTCGTGGC
GCTATTTCGT TTGCTGCCCG TGAAAAACTC GATAACTTAT GTTTTTTAAT TAACTGTAAC
TTACAGCGCC TCGACGGCCC TGTAATGGGT AACGGTAAGA TTATTCAAGA GCTTGAAGGT
TTATTCCGTG GTGCAGGTTG GAACGTTATC AAGGTGATTT GGGGTAACAA CTGGGATGCG
CTAATTGCCA AAGACACCTC AGGTAAGTTA TTGCAATTAA TGAATGAAAC CGTTGACGGT
GACTATCAAA CCTTTAAATC AAAAGATGGC GCTTATGTCC GTAAGCACTT CTTTGGTAAA
TATCCAGAAA CTGCGGCATT AGTGTCTGAT ATGACAGATG CAGAAATCTT CGCCCTGAAG
CGTGGTGGTC ATGAGCCATC TAAGCTGTAC ACGGCTTATA AAAACGCGCA AGAAACTAAG
GGGCGCCCAA CGGTTATTTT AGCTAAAACC GTTAAAGGTT ATGGCATGGG TGAGGCCGCA
GAAGGTAAAA ACATCGCTCA CCAAGTGAAG AAAATGGACA TGACCCATGT GCTTCAATTA
CGTGATCGTT TAGGCCTACA AGATCTGTTA ACCGATGAAG TGGTCGAGTC TTTACCTTAT
TTAACTCTTG AAGAGGGTTC TAAAGAGCAC GAGTACTTAC ATGCTCGTCG TAAAGCGCTA
CATGGCTACA CGCCGCAGCG TTTACCTAAT TTCACAGAGA GTTTAACCCT GCCCGCACTG
GAAGAATTTA CGCCACTGCT TGAAGAGCAA AAGCGCGAAA TTTCATCAAC AATGGCGTTT
GTGCGTACCT TAAATATTCT GCTTAAAGAT AAAGGCATCG GCCAGAATAT CGTGCCAATT
ATTGCCGATG AAGCACGTAC CTTTGGTATG GAAGGCTTAT TCCGTCAAAT AGGTATTTAT
AACCCATCAG GTCAAACTTA TACTCCTGAA GATCGCGCCG TTGTGTCTTA CTATAAAGAA
GCCACCTCAG GTCAAGTATT GCAAGAGGGG ATTAACGAGT TAGGTGCTAT GTCATCTTGG
GTTGCCGCGG CAACTTCGTA CAGCACTAAC AATTTACCCA TGATCCCTTT CTATATTTAC
TACTCTATGT TTGGTTTCCA ACGTGTAGGT GATATGGCAT GGCTTGCAGG TGACCAACAA
GCGCGTGGTT TCTTACTTGG CGCAACAGCG GGTCGTACTA CCTTAAATGG TGAAGGTTTA
CAGCATGAAG ATGGCCACAG CCATGTTCAA GCAAGCACGA TTCCTAACTG TATTTCATAC
GATCCAACAT TTGCTTATGA AGTCGCGGTT ATCATCCAAG ACGGTATTCG TCGTATGTAT
GGCAACCAAG AAAACGTGTT CTATTACTTA ACCTTAATGA ATGAAAACTA CGCCATGCCA
GCCATGCCAG CAGGTAGCGA AGCAGGCATT CGTAAGGGGA TTTATAAGCT TGAGTCGCAC
AAAGGCAGCA AGAAAGTACA GCTAATGAGC TCAGGCACAA TAATGAACGA AGTACGTAAA
GCGGCGCAAA TTCTAAGTGA AGAATATGAT GTGGCATCAG ACGTATTCTC AGTGACCTCA
TTTAACGAGC TTGCTCGTGA TGGTCAAGAC ACTGAGCGTT ACAACATGCT GCACCCTGAA
TCGGACGCCA AGCAAGCTTA TATCACCACA GTCTTGGGCA TTGAGCCTGC GATTGCTGCG
ACTGACTATA TGAAGAACTA TGCTGAGCAA GTACGTGCTT ACATGCCGTC TGTGTCTTAC
AAAGTATTGG GTACCGATGG TTTTGGCCGC TCAGATAGCC GTGAAAACTT ACGCCGTCAC
TTTGAAGTCA ATGCCGGATA TGTGGTGGTA GCGGCGCTGA GTGAACTGGC TAAACGTGGC
GATATCGAAA AGTCAGTCGT AACACAAGCG ATTGCTAAGT TCGCTATCGA CACCGAAAAG
ACCAACCCAT TATACGCATA A
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| Protein sequence | MSEHMLKDVD PQETSEWLSA LESVVREEGV ERAQYLLEQV LDKARLDGVD MPTGVTTNYV
NTIATKDEPA YPGDTTLERR IRSIIRWNAI MIVLRASKKD LDLGGHMASY QSSAAFYETC
FNHFFRAPNE KDGGDLVYYQ GHISPGIYAR AFVEGRLTAD QLDNFRQEVD GKGIPSYPHP
KLMPEFWQFP TVSMGLGPMS AIYQARFLKY LDGRGLKDTS AQRVYAFLGD GEMDEPESRG
AISFAAREKL DNLCFLINCN LQRLDGPVMG NGKIIQELEG LFRGAGWNVI KVIWGNNWDA
LIAKDTSGKL LQLMNETVDG DYQTFKSKDG AYVRKHFFGK YPETAALVSD MTDAEIFALK
RGGHEPSKLY TAYKNAQETK GRPTVILAKT VKGYGMGEAA EGKNIAHQVK KMDMTHVLQL
RDRLGLQDLL TDEVVESLPY LTLEEGSKEH EYLHARRKAL HGYTPQRLPN FTESLTLPAL
EEFTPLLEEQ KREISSTMAF VRTLNILLKD KGIGQNIVPI IADEARTFGM EGLFRQIGIY
NPSGQTYTPE DRAVVSYYKE ATSGQVLQEG INELGAMSSW VAAATSYSTN NLPMIPFYIY
YSMFGFQRVG DMAWLAGDQQ ARGFLLGATA GRTTLNGEGL QHEDGHSHVQ ASTIPNCISY
DPTFAYEVAV IIQDGIRRMY GNQENVFYYL TLMNENYAMP AMPAGSEAGI RKGIYKLESH
KGSKKVQLMS SGTIMNEVRK AAQILSEEYD VASDVFSVTS FNELARDGQD TERYNMLHPE
SDAKQAYITT VLGIEPAIAA TDYMKNYAEQ VRAYMPSVSY KVLGTDGFGR SDSRENLRRH
FEVNAGYVVV AALSELAKRG DIEKSVVTQA IAKFAIDTEK TNPLYA
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