Gene Sden_3383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3383 
SymbolaceE 
ID4019931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4035549 
End bp4038209 
Gene Length2661 bp 
Protein Length886 aa 
Translation table11 
GC content45% 
IMG OID637957436 
Productpyruvate dehydrogenase subunit E1 
Protein accessionYP_564382 
Protein GI91794731 
COG category[C] Energy production and conversion 
COG ID[COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component 
TIGRFAM ID[TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.771869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC ATATGCTAAA AGATGTTGAT CCACAAGAAA CTAGCGAGTG GTTGTCTGCT 
TTAGAATCTG TTGTACGCGA AGAAGGTGTG GAACGTGCTC AGTACTTACT TGAACAAGTA
CTAGATAAAG CTCGCTTAGA TGGCGTTGAT ATGCCGACTG GCGTGACTAC CAACTATGTT
AACACCATTG CCACCAAAGA TGAGCCAGCG TATCCAGGGG ATACCACATT AGAGCGCCGT
ATCCGTTCTA TCATACGTTG GAACGCAATC ATGATAGTGT TGCGCGCATC GAAAAAAGAT
TTAGATCTTG GCGGCCACAT GGCGTCTTAC CAATCTTCAG CCGCGTTTTA CGAAACCTGT
TTTAACCACT TTTTCCGCGC ACCTAATGAA AAAGACGGTG GCGATTTAGT CTATTATCAA
GGCCATATCT CCCCAGGTAT TTATGCTCGT GCCTTTGTTG AAGGTCGTTT AACGGCGGAT
CAATTAGATA ACTTCCGTCA GGAAGTGGAT GGAAAAGGCA TCCCTTCGTA TCCACACCCT
AAATTAATGC CTGAGTTTTG GCAGTTCCCA ACGGTATCTA TGGGCTTAGG TCCAATGTCG
GCCATTTATC AAGCGCGTTT CTTAAAATAC CTTGACGGTC GTGGCCTAAA AGATACTTCT
GCGCAGCGGG TTTACGCCTT CTTAGGTGAT GGCGAGATGG ACGAGCCAGA ATCTCGTGGC
GCTATTTCGT TTGCTGCCCG TGAAAAACTC GATAACTTAT GTTTTTTAAT TAACTGTAAC
TTACAGCGCC TCGACGGCCC TGTAATGGGT AACGGTAAGA TTATTCAAGA GCTTGAAGGT
TTATTCCGTG GTGCAGGTTG GAACGTTATC AAGGTGATTT GGGGTAACAA CTGGGATGCG
CTAATTGCCA AAGACACCTC AGGTAAGTTA TTGCAATTAA TGAATGAAAC CGTTGACGGT
GACTATCAAA CCTTTAAATC AAAAGATGGC GCTTATGTCC GTAAGCACTT CTTTGGTAAA
TATCCAGAAA CTGCGGCATT AGTGTCTGAT ATGACAGATG CAGAAATCTT CGCCCTGAAG
CGTGGTGGTC ATGAGCCATC TAAGCTGTAC ACGGCTTATA AAAACGCGCA AGAAACTAAG
GGGCGCCCAA CGGTTATTTT AGCTAAAACC GTTAAAGGTT ATGGCATGGG TGAGGCCGCA
GAAGGTAAAA ACATCGCTCA CCAAGTGAAG AAAATGGACA TGACCCATGT GCTTCAATTA
CGTGATCGTT TAGGCCTACA AGATCTGTTA ACCGATGAAG TGGTCGAGTC TTTACCTTAT
TTAACTCTTG AAGAGGGTTC TAAAGAGCAC GAGTACTTAC ATGCTCGTCG TAAAGCGCTA
CATGGCTACA CGCCGCAGCG TTTACCTAAT TTCACAGAGA GTTTAACCCT GCCCGCACTG
GAAGAATTTA CGCCACTGCT TGAAGAGCAA AAGCGCGAAA TTTCATCAAC AATGGCGTTT
GTGCGTACCT TAAATATTCT GCTTAAAGAT AAAGGCATCG GCCAGAATAT CGTGCCAATT
ATTGCCGATG AAGCACGTAC CTTTGGTATG GAAGGCTTAT TCCGTCAAAT AGGTATTTAT
AACCCATCAG GTCAAACTTA TACTCCTGAA GATCGCGCCG TTGTGTCTTA CTATAAAGAA
GCCACCTCAG GTCAAGTATT GCAAGAGGGG ATTAACGAGT TAGGTGCTAT GTCATCTTGG
GTTGCCGCGG CAACTTCGTA CAGCACTAAC AATTTACCCA TGATCCCTTT CTATATTTAC
TACTCTATGT TTGGTTTCCA ACGTGTAGGT GATATGGCAT GGCTTGCAGG TGACCAACAA
GCGCGTGGTT TCTTACTTGG CGCAACAGCG GGTCGTACTA CCTTAAATGG TGAAGGTTTA
CAGCATGAAG ATGGCCACAG CCATGTTCAA GCAAGCACGA TTCCTAACTG TATTTCATAC
GATCCAACAT TTGCTTATGA AGTCGCGGTT ATCATCCAAG ACGGTATTCG TCGTATGTAT
GGCAACCAAG AAAACGTGTT CTATTACTTA ACCTTAATGA ATGAAAACTA CGCCATGCCA
GCCATGCCAG CAGGTAGCGA AGCAGGCATT CGTAAGGGGA TTTATAAGCT TGAGTCGCAC
AAAGGCAGCA AGAAAGTACA GCTAATGAGC TCAGGCACAA TAATGAACGA AGTACGTAAA
GCGGCGCAAA TTCTAAGTGA AGAATATGAT GTGGCATCAG ACGTATTCTC AGTGACCTCA
TTTAACGAGC TTGCTCGTGA TGGTCAAGAC ACTGAGCGTT ACAACATGCT GCACCCTGAA
TCGGACGCCA AGCAAGCTTA TATCACCACA GTCTTGGGCA TTGAGCCTGC GATTGCTGCG
ACTGACTATA TGAAGAACTA TGCTGAGCAA GTACGTGCTT ACATGCCGTC TGTGTCTTAC
AAAGTATTGG GTACCGATGG TTTTGGCCGC TCAGATAGCC GTGAAAACTT ACGCCGTCAC
TTTGAAGTCA ATGCCGGATA TGTGGTGGTA GCGGCGCTGA GTGAACTGGC TAAACGTGGC
GATATCGAAA AGTCAGTCGT AACACAAGCG ATTGCTAAGT TCGCTATCGA CACCGAAAAG
ACCAACCCAT TATACGCATA A
 
Protein sequence
MSEHMLKDVD PQETSEWLSA LESVVREEGV ERAQYLLEQV LDKARLDGVD MPTGVTTNYV 
NTIATKDEPA YPGDTTLERR IRSIIRWNAI MIVLRASKKD LDLGGHMASY QSSAAFYETC
FNHFFRAPNE KDGGDLVYYQ GHISPGIYAR AFVEGRLTAD QLDNFRQEVD GKGIPSYPHP
KLMPEFWQFP TVSMGLGPMS AIYQARFLKY LDGRGLKDTS AQRVYAFLGD GEMDEPESRG
AISFAAREKL DNLCFLINCN LQRLDGPVMG NGKIIQELEG LFRGAGWNVI KVIWGNNWDA
LIAKDTSGKL LQLMNETVDG DYQTFKSKDG AYVRKHFFGK YPETAALVSD MTDAEIFALK
RGGHEPSKLY TAYKNAQETK GRPTVILAKT VKGYGMGEAA EGKNIAHQVK KMDMTHVLQL
RDRLGLQDLL TDEVVESLPY LTLEEGSKEH EYLHARRKAL HGYTPQRLPN FTESLTLPAL
EEFTPLLEEQ KREISSTMAF VRTLNILLKD KGIGQNIVPI IADEARTFGM EGLFRQIGIY
NPSGQTYTPE DRAVVSYYKE ATSGQVLQEG INELGAMSSW VAAATSYSTN NLPMIPFYIY
YSMFGFQRVG DMAWLAGDQQ ARGFLLGATA GRTTLNGEGL QHEDGHSHVQ ASTIPNCISY
DPTFAYEVAV IIQDGIRRMY GNQENVFYYL TLMNENYAMP AMPAGSEAGI RKGIYKLESH
KGSKKVQLMS SGTIMNEVRK AAQILSEEYD VASDVFSVTS FNELARDGQD TERYNMLHPE
SDAKQAYITT VLGIEPAIAA TDYMKNYAEQ VRAYMPSVSY KVLGTDGFGR SDSRENLRRH
FEVNAGYVVV AALSELAKRG DIEKSVVTQA IAKFAIDTEK TNPLYA