| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3382 |
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| Symbol | aceF |
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| ID | 4019930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4033637 |
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| End bp | 4035535 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957435 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_564381 |
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| Protein GI | 91794730 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.141641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCG AAATTAATGT ACCGGATATA GGTGCGGATG AGGTTGAAGT TACTGAGATC
TTAGTTAGCG TAGGTGACAA GGTTGAAGAA GAACAATCGC TGATTTCTGT TGAAGGCGAT
AAAGCTGCAA TGGAAGTACC AGCCTCTGCT GCGGGGATTG TGAAAGAAAT TAAAGTGAAA
GTGGGCGACA AGGTCGCGAC CGACTCATTA ATTATGATTT TTGAGTCAGA TGCCGCGCCT
GCAGCATCAC AAGCACCCGT TGCCAGTGCT GTACCACAAG CGTCTGTCGC TAGTGCGTCA
GCGGCAAGTG CTGCTCCTGT GCTAAAAGAA GTGCATGTGC CAGATATTGG CGGCGATGAA
GTGTCAGTGA CCGAAATTTT AGTTAAGCTT GGCGACACCA TTACCGAGGA GCAAGCCTTA
TTTAGCGTTG AAGGCGACAA AGCGGCGATG GAAGTGCCTG CACCCTTTGC AGGTGTGCTT
AAAGAAATCA AAGTGGCTGT TGGCGATAAC GTCTCAACTG GCTCACTTGT GATGGTATTT
GAAGTGGCAG GCAGCGCACC AACTGCGGCT CCTGCAACAC AAGCTGCTCC ACAAGCGGTA
GCTGCAGTGG CAACCACTGC AGCGGTTCAG GATGTTAACG TACCCGATAT CGGTGGCGAC
GAAGTCATAG TTACCGAAGT GATGGTAAAA GTGGGTGACA CAGTTGCAGA AGAGCAATCT
TTAATTAGCG TTGAAGGCGA TAAAGCGGCT ATGGAAGTGC CAACACCATT TGCTGGAACC
GTGAAGTCAA TTATTGTTAG CCAAGGCGAT AAAGTATCAA CTGGCTCATT AATTATGACC
TTTGAGGTGG CGGGTAGCGC GCAAGCTGCG ACTCCTGCAG TCAGTGCACC CGTTGCAGCG
ACTCAAGCGC CGGCGGCTCC TGCACAAACA GCTTCTGTAG TGGCAAAAGA AGATTTTGTT
GAAAACAGTG CTTATGCCCA TGCATCACCT GTTATTCGCC GCATGGCCCG TGAGCTAGGG
GTTAACCTGG CTAACGTAAA AGGCACTGGT CGCAAAGGTC GTGTGGTTAA AGAAGACGTG
CAAAACTACG TGAAAGCGGC GGTCAAGCAA GTTGAATCTG GCGCGGTTAA ATCAGCAGGT
AATGGCGGCG GTGAGCTAAA TCTACTCCCA TGGCCAAAAG TTGACTTTAA CAAGTTTGGC
GAAACTGAAG TTAAGCCTTT ATCGCGTATT CAGAAGATTT CTGGTGCTAA CCTTCACCGT
AACTGGGTGA AAATCCCTCA TGTTACTCAG TGGGATGATG CCGATATTAC CGAGCTTGAA
GACTTCCGTA AGGCACAAAA TGCACTAGAA GCTAAGAAAG ATTCTGGCAT GAAGATCACC
CCACTGGTGT TCATCATGAA AGCGGTCGCT AAAGCCTTAG AAGCTTATCC AACGTTTAAC
TCTTCATTAT CAGAAGATGG CGAAAGCTTA ATTTTGAAGA AGTATGTCAA CATTGGTATT
GCGGTTGATA CGCCAAACGG TCTTGTGGTG CCTGTGTTTA AAGATGTCAA TAAAAAAGGC
ATCCACGAGT TATCGAACGA GCTTAAACAG GTATCGAAAA AAGCTCGCGA TGGCAAGTTA
ACGGCATCTG ATATGCAAGG CGGCTGTTTC ACTATTTCAA GCCTTGGCGG TATTGGCGGC
ACAGCATTTA CACCAATAGT CAATGCGCCG GAAGTGGCTA TCTTAGGTGT GTCTAAATCT
GACTTTAAAC CAGTGTGGAA TGGTAAAGAG TTCGCTCCAC GCTTAATGCT ACCGTTGTCA
CTATCATACG ATCACCGTGT GATTGACGGC GCTGATGGAG CAAGGTTTAT TACCTATCTG
AATCAGTGCT TATCAGATAT TCGTACCTTA GTGTTGTAA
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| Protein sequence | MAIEINVPDI GADEVEVTEI LVSVGDKVEE EQSLISVEGD KAAMEVPASA AGIVKEIKVK
VGDKVATDSL IMIFESDAAP AASQAPVASA VPQASVASAS AASAAPVLKE VHVPDIGGDE
VSVTEILVKL GDTITEEQAL FSVEGDKAAM EVPAPFAGVL KEIKVAVGDN VSTGSLVMVF
EVAGSAPTAA PATQAAPQAV AAVATTAAVQ DVNVPDIGGD EVIVTEVMVK VGDTVAEEQS
LISVEGDKAA MEVPTPFAGT VKSIIVSQGD KVSTGSLIMT FEVAGSAQAA TPAVSAPVAA
TQAPAAPAQT ASVVAKEDFV ENSAYAHASP VIRRMARELG VNLANVKGTG RKGRVVKEDV
QNYVKAAVKQ VESGAVKSAG NGGGELNLLP WPKVDFNKFG ETEVKPLSRI QKISGANLHR
NWVKIPHVTQ WDDADITELE DFRKAQNALE AKKDSGMKIT PLVFIMKAVA KALEAYPTFN
SSLSEDGESL ILKKYVNIGI AVDTPNGLVV PVFKDVNKKG IHELSNELKQ VSKKARDGKL
TASDMQGGCF TISSLGGIGG TAFTPIVNAP EVAILGVSKS DFKPVWNGKE FAPRLMLPLS
LSYDHRVIDG ADGARFITYL NQCLSDIRTL VL
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