| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3377 |
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| Symbol | |
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| ID | 4019925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4020846 |
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| End bp | 4023443 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957430 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_564376 |
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| Protein GI | 91794725 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAGAAG CATATCGTAA ACACGTCGCA GAACGTGCTG CAGAGGGCGT AGTCCCTAAG
CCATTAGATG CACAACAAGT GGCTGAACTG GTTAAGTTAG TTGAAACACC TCCAGCAGGT
GAAGAGGCAT TCATCCTCGA CTTGCTCGAA AATCGTATTC CACCAGGCGT AGACGAAGCC
GCTTATGTTA AAGCGGCTTT TCTTGATGCT GTCGCCAAAG GCACAGTGTC ATCATCTATC
CTAAGCGCAG CGCGCGCCGT TGAACTGCTT GGCACTATGC AAGGCGGTTA CAACATTGAG
CCGTTAATCG CTCAATTAGA GAACTCAGCA CTGGCGCCAT TAGCAGTCAA AGCGTTATCA
AACACCTTGT TAATGTTTGA TTCTTACCAC GATGTGGTTG AGAAAATGCA AGCGGGTAAT
GATCACGCTA AGCAAGTGGT TGAAGCTTGG GCCAATGCAG ACTGGTTCTT AAACCGTCCA
AAATTAGCCG AAAAAGTCAC CTTAACCGTA TTTAAAGTGG CTGGCGAAAC CAACACAGAT
GACTTGTCAC CAGCGCCAGA CGCATGGTCA CGTCCAGACA TCCCATTGCA TGCCTTAGCT
ATGCTGAAAA ACGCCCGTGA CGGTATCGTA CCTGATGAGC CAGGCGTTGT GGGTCCAATT
AAAGAAATCG AAGCCCTTAA AACGAAAGGT CATCCACTGG TTTATGTGGG TGACGTAGTA
GGTACTGGTT CTTCACGAAA ATCTGCCACT AACTCAGTGT TATGGTTCAT GGGCGATGAT
ATCCCTAATG TGCCTAACAA GCGTGCTGGT GGTTTCTGCT TAGGTAACAA GATAGCACCC
ATTTTCTTCA ATACGATGGA AGATGCCGGT GCATTACCGA TAGAGCTGAA CGTTGATAAC
ATGGAAACCG GTGATGTTAT CGATATCTAC CCTTATGCAG GGCAGGTTAA GCGTCACGGT
ACTGACGAAG TCATCTCTGA GTTTGAGTTA AAAACCGAAG TCTTGTTAGA CGAAGTACGC
GCCGGTGGCC GTATTCCGTT AATCATTGGC CGTGGTCTAA CCGATCGTGC TCGTGAAACA
TTAGGCCTTG ACGTGTCTAA GGTATTCGTA CGTTCACAAG ACGTTGCCGA TACAGGTAAA
GGTTACACTC TCGTTCAGAA GATGGTGGGT AAAGCTTGTG GTGTTGCCGG TGTTCGCCCT
GGCCAATACT GTGAGCCTAA GATGACCTCT GTGGGTTCAC AAGACACTAC CGGTCCTATG
ACCCGTGACG AGCTAAAAGA TTTAGCTTGT TTAGGTTTCA GCGCCGACTT AACCATGCAG
TCTTTCTGTC ACACTGCGGC TTATCCAAAG CCAGTTGACG TTGACACTCA CCACACACTG
CCTGATTTCA TCATGAACCG TGGCGGCGTT TCACTGCGTC CAGGTGATGG TGTAATTCAC
TCGTGGTTAA ACCGTATGCT ACTGCCTGAT ACCGTAGGTA CGGGTGGTGA TTCGCATACC
CGTTTCCCAA TTGGTGTGTC TTTCCCTGCA GGTTCTGGCT TAGTGGCGTT TGCTGCTGCA
ACGGGCGTTA TGCCACTTGA TATGCCTGAA TCAGTATTGG TGCGCTTTAA AGGTGAAATG
CAACCAGGTA TCACTTTACG TGATCTTGTG CATGCTATCC CGCTTAAAGC CATTGAAATG
GGGCTATTAA CGGTTGAGAA GAAAGGCAAG ATCAACGCTT TCTCTGGCCG AGTATTAGAA
ATCGAAGGTC TTGAAAAACT TAAAGTTGAG CAAGCGTTCG AGCTTTCTGA TGCATCCGCC
GAGCGTAGTG CTGCAGGTTG TACTATCAAG CTAGACAAAG AGCCAATCAT CGAATACCTA
AACTCTAACA TAGTGATGTT AAAGTGGATG ATAAGCGAAG GTTATGGCGA TCGTCGTACC
ATTGAGCGTC GTATCACAGC GATGCAAGAT TGGTTAGCCA ACCCAGTGCT GATGGAAGCC
GATAAAGACG CAGAATACGC CGAAATTATC GAAATCGACT TAAACGACAT CAAAGAGCCA
ATCCTATGTG CGCCGAACGA TCCTGATGAT GCGGTACTGT TATCAAGCGT TGCACAAACT
AAGATTGACG AAGTGTTCGT CGGTTCTTGT ATGACTAACA TAGGTCACTT CCGTGCGACC
GGTAAGATGT TAGACAAGTT CGCGAAAACA CTACCAACAC GTTTGTGGAT TGCGCCGCCA
ACTAAGATGG ACCGCGATCA GCTAACTGAA GAAGGTTACT ACTCTATCTT CGGCCGTGTG
GGTGCTCGCA TCGAGATCCC TGGTTGTTCA TTGTGTATGG GTAACCAGGC ACGTGTTGCT
GAAGGTGCGA CTGTCGTGTC GACGTCTACG CGTAACTTCC CGAACCGTTT AGGTACTGGC
GCAAATGTAT ACTTAGCTTC GGCTGAGCTT GCAGCAGTCG CGGCCTTATT GGGCCGCCTG
CCGTCACCAG AAGAGTATCA AACTTACGCT AAAGAATTAG ATGCTACGGC AGCTGATACT
TACCGTTACT TGAACTTCGA TCAAATCGAT TCTTACACTA AGAAAGCCGA CAGCGTGATT
TTCCAATCCG CAGTCTAA
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| Protein sequence | MLEAYRKHVA ERAAEGVVPK PLDAQQVAEL VKLVETPPAG EEAFILDLLE NRIPPGVDEA
AYVKAAFLDA VAKGTVSSSI LSAARAVELL GTMQGGYNIE PLIAQLENSA LAPLAVKALS
NTLLMFDSYH DVVEKMQAGN DHAKQVVEAW ANADWFLNRP KLAEKVTLTV FKVAGETNTD
DLSPAPDAWS RPDIPLHALA MLKNARDGIV PDEPGVVGPI KEIEALKTKG HPLVYVGDVV
GTGSSRKSAT NSVLWFMGDD IPNVPNKRAG GFCLGNKIAP IFFNTMEDAG ALPIELNVDN
METGDVIDIY PYAGQVKRHG TDEVISEFEL KTEVLLDEVR AGGRIPLIIG RGLTDRARET
LGLDVSKVFV RSQDVADTGK GYTLVQKMVG KACGVAGVRP GQYCEPKMTS VGSQDTTGPM
TRDELKDLAC LGFSADLTMQ SFCHTAAYPK PVDVDTHHTL PDFIMNRGGV SLRPGDGVIH
SWLNRMLLPD TVGTGGDSHT RFPIGVSFPA GSGLVAFAAA TGVMPLDMPE SVLVRFKGEM
QPGITLRDLV HAIPLKAIEM GLLTVEKKGK INAFSGRVLE IEGLEKLKVE QAFELSDASA
ERSAAGCTIK LDKEPIIEYL NSNIVMLKWM ISEGYGDRRT IERRITAMQD WLANPVLMEA
DKDAEYAEII EIDLNDIKEP ILCAPNDPDD AVLLSSVAQT KIDEVFVGSC MTNIGHFRAT
GKMLDKFAKT LPTRLWIAPP TKMDRDQLTE EGYYSIFGRV GARIEIPGCS LCMGNQARVA
EGATVVSTST RNFPNRLGTG ANVYLASAEL AAVAALLGRL PSPEEYQTYA KELDATAADT
YRYLNFDQID SYTKKADSVI FQSAV
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