| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3374 |
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| Symbol | |
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| ID | 4019922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4017704 |
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| End bp | 4018330 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637957427 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_564373 |
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| Protein GI | 91794722 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA GCGCGCCAAA TAAGGATGGC TCAATCGAGG CTAATCTGAC TGATTTACAA
GTTCAAACTG AACTTTATCA GTGGCTTAGC TTGGTAAGTC ATCAAAGAGA CAAGCAGGCC
TTCACTGAAC TGTTTCAGTT TTTTGCGCCT AAAATTAAGC GTTTTGGCAT GCAGCGTCTA
GGCAGTAATG ACAAGGCCAA TGAGCTGGTG CAAGAAACCA TGTCCAATGT TTGGCGCAAA
GCTCACCTTT ATGATGGGGA GAAAGGGGCT GCAACCACTT GGGTTTATAC CGTAATGCGT
AATGCTTGTT TCGATATGTT AAGGCGAATT AAAACCAGAA ATGAACAGCT ATTAGGTGAT
GATATTTGGC CTGTGGAACA AGCACTAGCA GAAAACAACC CCGAGTCAGA GACCTTTAGC
GACCATTTGA TGGAACAGCA CATGCGTGAG CATATTAATA AGCTGCCTTC TTCACAACAA
ACGGTAGTGA AAGGGGTGTA TTTCCAATCC CTGTCTCAAG AACAGTTAGC CCAGCAGCTT
GACGTGCCAC TCGGTACCAT TAAATCGCGA CTCAGACTTG CATTGGCAAG GCTTAAGCTG
CAAATGAGAG ATGAATATCA TGATTAA
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| Protein sequence | MKNSAPNKDG SIEANLTDLQ VQTELYQWLS LVSHQRDKQA FTELFQFFAP KIKRFGMQRL
GSNDKANELV QETMSNVWRK AHLYDGEKGA ATTWVYTVMR NACFDMLRRI KTRNEQLLGD
DIWPVEQALA ENNPESETFS DHLMEQHMRE HINKLPSSQQ TVVKGVYFQS LSQEQLAQQL
DVPLGTIKSR LRLALARLKL QMRDEYHD
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