Gene Sden_3371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3371 
Symbol 
ID4019919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4015683 
End bp4016402 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content47% 
IMG OID637957424 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_564370 
Protein GI91794719 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCA TGATAACGGG GGCGACATCG GGTATAGGTA AGGCCTTGAC CTTAGCGTAT 
GCCCAAGCTG GACACCAAAT TATTGCCTGT GGCCGAAACC ATGAAAAACT CAATGAGCTG
GCGGCAGTGT CACCCAATAT CGAAACCTTG TGTTTTGACC TTTCTGAATA TGGATCTTAC
CCAAGCTTGT CGCCAGAACA AGTGCCACTG GACCTGCTGA TGTTAAATGC CGGTGATTGT
GAATACATCG ATGATGCGCT GGCATTCGAC GCTAAGCGTT TCGAAAAAAT TATCAACATC
AATTTAATTT CAGTGGCTTA TTGTCTACAA GCTTGGTTGC CACAGATAAA GCCCATGGGG
CGCTTGGTGT TAATCAGTTC CAGCGCTCAA TTCTTACCCT TGTCCAGGGC TGAGGCTTAT
GGTGCATCAA AAGCGGCGCT GACTTATCTT GGTCGCACCT TGGCCATAGA TTTAGCTAAG
CATCAAATCC AAGTTACCTT GGTTCACCCA GGGTTTGTCG ATACCCCGCT CACTAAGCGT
AACCGTTTTG CCATGCCAAT GCTTATCACC AGCGAGCAAG CGGCGACAAA TATTATTCTC
GGGCTGGAAA AGGGGCAAAG TGAGATTGCC TTCCCGAAAT TATTTATATT TCTTATCAGA
TGTTTAGCCA TATTACCCCA GGGGCTTTGG CGTAGGCTGG CCTTAAGGAT GTCATCATGA
 
Protein sequence
MRIMITGATS GIGKALTLAY AQAGHQIIAC GRNHEKLNEL AAVSPNIETL CFDLSEYGSY 
PSLSPEQVPL DLLMLNAGDC EYIDDALAFD AKRFEKIINI NLISVAYCLQ AWLPQIKPMG
RLVLISSSAQ FLPLSRAEAY GASKAALTYL GRTLAIDLAK HQIQVTLVHP GFVDTPLTKR
NRFAMPMLIT SEQAATNIIL GLEKGQSEIA FPKLFIFLIR CLAILPQGLW RRLALRMSS