| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3356 |
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| Symbol | |
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| ID | 4019904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3998818 |
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| End bp | 4001022 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637957409 |
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| Product | primosomal protein N' |
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| Protein accession | YP_564355 |
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| Protein GI | 91794704 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTGT TTGTTGAACT CGCCTTACCC GTCCCCATGC GACAAAATTT TACCTATCGC
GTGCCAGAGA CAATAAAACA AACACTGCAC ATCGGCCTTA GAGTCAAGGT GTCTTTTGGG
CGTCAGCAAT TAATTGGACT TATCACGGCG ATAAGTGATG AGTGCTCATT GCCTGCCACG
CAAATTAAAT CCATTAGCGC CATTTTAGAC CATGAGCCTA TATTACCTAC AGCACTTTAT
AAATTAACCC TTTGGGCAGC AAGATATTAT TTCACCAGCC AAGGGCAAAT GCTCAGTCAG
GCACTGCCGG TTGCTTTGCG AAAAGGCGCA GACACGCAAG GGCAAGACAT CACCCGCTTT
GAACTCACAG ACTCAGGTAA ACAACTCGAA CCCATCAGTT TAAAACGTGC CCCTGCCCAA
AAAAAGTTGC TGGAAATACT GCAACAAGCG CCAAGCCTAG GCCTGAACCA AGATGAATTT
ACTGCCTTAG GGCTCAGTAA GCCAGCCTTA ACAGCCCTTG AGACCAAGGG CTGGTTGCAG
CGAGTCCAAG TGCAATTGAA CGTCGATTTA AGCTGGCGTG AGGCGCTAAA TCTAGGTGAA
GCGCCCCATA AGCTTAATAA ACAGCAAGCT GTAGCCGTGG CTGTACTCAC CCAGCAAACG
GGCTTTGCCT GCACCTTACT GGAGGGCATC ACAGGCTCTG GTAAGACAGA AGTGTACTTG
GCTATGATAG AAACTCAGCT TAAGCAGGGT AAACAAGCCT TAGTGCTAGT GCCTGAAATC
GGTTTGACGC CGCAAACCAT TAGTCGCTTT AAGCGCCGTT TTAAGGTGGA TGTGGCGGTT
ATCCATTCAG GCCTGACTGA CAATCAAAGA TTAGATGCCT GGCGCATGGC CCGCTGCGGT
CAAGCCGCCA TCATCATAGG CACCCGCTCG GCGCTGTTTA CCCCCATGGC TTATCCTGGG
GTTATCATCT TAGATGAAGA ACATGATGCC AGCTTTAAGC AGCAAGAAGG GGTGCGTTAT
CACGCCCGTG ACTTAGCCGT GATGCGGGGC CAGTTGGAGA ATATCCCGGT CATTTTAGGC
ACGGCGACCC CCTCACTGGA GAGCTTGCAA AATGCCTTAA GTGGCCGTTA CAGCCATTTG
GAACTGGGCG AGCGCGCCGG TGCGGCGCAA AAAGTAAAAC AAGGCATCAT AGACATTCGC
AGCCAACCGC TAAAATCAGG CATGTCGACG TCCTTAATCA ACGAGATGCG CATGCACTTG
GATGCCGGCA ATCAAGTATT GTTGTTCCTG AATAGGCGCG GCTTTGCTCC CGCGCTCTTG
TGCCATGAAT GCGGCCATTT ACATGAATGC GACCGCTGCG ATGCCTATTT TACCTTGCAC
CAAGGCCTTA ATGAGATTTG CTGTCACCAT TGTGGTAATC AATACGCCAT CCCTAAACAG
TGCCACAGCT GCGGCAGTAG CATGCTTATG GGTCACGGCA TAGGCACAGA GCAATTAGAA
AAAGCCCTAG AGAAAGAATT TCCCCAGCAC AAAGTGGTGC GCATCGACAG AGACACCACT
CGCCGCAAAG GCTCGCTTGA AAAACAACTG GCAGGCATTC ATAAGGGGGA GTACAAGATC
TTAGTCGGCA CCCAGATGCT GGCCAAGGGC CATCACTTCC CCGATGTCAC CTTAGTGGGG
CTTTTAGATG TGGATGGCGC GCTATTCAGC GCAGATTTTA GGGCCCCAGA GCGCTTTGGC
CAGCTCTATA CCCAAGTCTC TGGCCGCGCG GGCCGCGCCG ACAAGCCTGG TAAGGTATTG
CTGCAAACCC GTCAGAGTGA GAACGTCATC TTGAGGGATT TATTGCGCCA AGGGTACGGT
GACTTTGCCC GTGGCCAACT CAAAGAGCGC CAGCTGGCGC TATTGCCACC GGCCTGGAAC
ATGGTGCTAT TACGGGCCGA TGCTCACCTC GCCGAAGATG CGGATAACTT CCTCAGGCAA
GTGGCTAAAT TATTGCCCCA AGATAATGAA TTTGAAGTGA TTGGCCCCAT GCCAGCGCCA
CTGGATAGAA AAGCGGGACG CTATCGCCGC CAGCTTATTT TCCAAGCCAA ACACAGACAA
AGACTGCAAC AAGAATTTGA GCTGGCGCTG CCTCAGATAG AAGCCCTGCC AGAAGGACGC
CGCTGCCGCT GGAGTATTGA CCGGGATCCA CAAGATTTAA TGTAA
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| Protein sequence | MPVFVELALP VPMRQNFTYR VPETIKQTLH IGLRVKVSFG RQQLIGLITA ISDECSLPAT
QIKSISAILD HEPILPTALY KLTLWAARYY FTSQGQMLSQ ALPVALRKGA DTQGQDITRF
ELTDSGKQLE PISLKRAPAQ KKLLEILQQA PSLGLNQDEF TALGLSKPAL TALETKGWLQ
RVQVQLNVDL SWREALNLGE APHKLNKQQA VAVAVLTQQT GFACTLLEGI TGSGKTEVYL
AMIETQLKQG KQALVLVPEI GLTPQTISRF KRRFKVDVAV IHSGLTDNQR LDAWRMARCG
QAAIIIGTRS ALFTPMAYPG VIILDEEHDA SFKQQEGVRY HARDLAVMRG QLENIPVILG
TATPSLESLQ NALSGRYSHL ELGERAGAAQ KVKQGIIDIR SQPLKSGMST SLINEMRMHL
DAGNQVLLFL NRRGFAPALL CHECGHLHEC DRCDAYFTLH QGLNEICCHH CGNQYAIPKQ
CHSCGSSMLM GHGIGTEQLE KALEKEFPQH KVVRIDRDTT RRKGSLEKQL AGIHKGEYKI
LVGTQMLAKG HHFPDVTLVG LLDVDGALFS ADFRAPERFG QLYTQVSGRA GRADKPGKVL
LQTRQSENVI LRDLLRQGYG DFARGQLKER QLALLPPAWN MVLLRADAHL AEDADNFLRQ
VAKLLPQDNE FEVIGPMPAP LDRKAGRYRR QLIFQAKHRQ RLQQEFELAL PQIEALPEGR
RCRWSIDRDP QDLM
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