| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3355 |
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| Symbol | |
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| ID | 4019903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3997762 |
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| End bp | 3998685 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957408 |
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| Product | hypothetical protein |
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| Protein accession | YP_564354 |
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| Protein GI | 91794703 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAG GATTTATATT TAACACCTTA TTTCTAGTTT ATACCTGTCT ATACCTTCTA
CCCGTTGAGG CCAATGTCGA CCATGTCAGT ATCAATAGTC GTCAATCTGA GTTAGGACAA
CATCCGCAAT TAAAAGTGAA TCTGGTGGCG GACAAGAATG AAGTCTCTAA ATTGGCCTTT
TATGTGCAGC AAATGCACGG CAGCGATAAA CAACAAGAAC AGCTGATGGT TAGGCCCATT
AATAACTATC TCTTGATGGT GACAGGCACC GAAGAGGTGA CGGATAAGCA AGCGAAATTA
ATAGTGCAAA GATATCGCAG AGGCAACTGG AATACTTATC TTGAGCTGCC CTTGTTCGAT
TCGCCTCATT CAGAAAAGAG TGCCACCTTA GTGCAATCAA AAGCCATTAG CCAAAGTATT
GCCGGTGTGA AGGCTCAGGC GGCACAAAAT CCCGCCTCAT CTGTCAGCCG TTTCGCCAGC
AATAGTGTCA AAGACGTCAA GGCCAAGGCG GTGAAGACCC AAACCCCTGA ACCCACTATT
GAAATGAACA CAGCATCCTC AGATAAGCCT GCGGTAGAGG CAAGCAAAGT TAACCCAGCT
CCTGAGGCTC AAGCCCCTGG GAGTCAAGGC ATTTGCCGCT TACCCTATGA GGCGGGGCAG
ACGCTTTGGC GCATTGCTAA CCATTACGCT CCCAGTTGGC GAGTGAATAT ATATGGTGCC
ATGCTAGCCA TCTATAATAG CAATCCCCAG GCATTTGCCG GCGGCGATAT TCAACGTTTG
ATGGTGGATG CCGAGCTGAT TTGCCCGACA CGTACTGAGT TAAGTCAATA TTTGGATAAA
GACATAGATA TCCTTAAGTT TGAAATCCAA TTAGCTAAAG CCCAGTTAGT CAAAGAGAAT
AAGCGTAAAG CGCAAGGGAA CTGA
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| Protein sequence | MHKGFIFNTL FLVYTCLYLL PVEANVDHVS INSRQSELGQ HPQLKVNLVA DKNEVSKLAF
YVQQMHGSDK QQEQLMVRPI NNYLLMVTGT EEVTDKQAKL IVQRYRRGNW NTYLELPLFD
SPHSEKSATL VQSKAISQSI AGVKAQAAQN PASSVSRFAS NSVKDVKAKA VKTQTPEPTI
EMNTASSDKP AVEASKVNPA PEAQAPGSQG ICRLPYEAGQ TLWRIANHYA PSWRVNIYGA
MLAIYNSNPQ AFAGGDIQRL MVDAELICPT RTELSQYLDK DIDILKFEIQ LAKAQLVKEN
KRKAQGN
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