| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3349 |
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| Symbol | |
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| ID | 4019897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3991286 |
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| End bp | 3991942 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637957402 |
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| Product | MSHA biogenesis protein MshJ |
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| Protein accession | YP_564348 |
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| Protein GI | 91794697 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCAGC AGTGGCAAGC GTTAGCCAGC AAATTTAATG AATTAAGCCA GCGTGAACGT
GTTTTGGTCG GGTTTGCGAG CTTAGTGTTA GTCGTATTTA GCTGTTTTAT GCTACTTGAA
CCTATGTTGT TGGATAACCA GCAAAGGGCG CAGCACTTAA AGGAGCTGCA TCATTCCAAT
CAAATGGCGT CTCAGTCTAT TGCTGTGTAT CAACAAGGCT TGAGTTTAGA TCCCGATGCC
GATTATAAGC AGCGCCTTGC CATGCTAGAG CAACAGCTGA TATTTGTGGA TGCCGAACTT
AGCGAACAAA TGGTGGATAT GATCCCAGCG GATTATATGC CAGCGGTCTT GGCACAACTC
TTAAGTCAGG TAAAAGGGTT AACCCTGCTA GGCTTTAGCT CGCTGCCACC TCAGGCTCTG
TTAGGCTCAG AAGAAGTTAA CAAGTTGAAT TTATACAGCC ATGGCATCAA GTTGACCCTA
GAAGGGGATT ATTTTTCCTT CTTAAACTTC GTCAAGGCGG TTGAAGCCAT GCCAGATAAG
CTCTATTGGA AACGCCTCGA TTATCAAGTG GCTAGCCACC CTAAGGCGAG TATTGAACTT
GAGCTTTATA CCTTAAGCAT TAATAAGGAC TTTATCAGTG TTGCTAAACA TGACTAA
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| Protein sequence | MKQQWQALAS KFNELSQRER VLVGFASLVL VVFSCFMLLE PMLLDNQQRA QHLKELHHSN
QMASQSIAVY QQGLSLDPDA DYKQRLAMLE QQLIFVDAEL SEQMVDMIPA DYMPAVLAQL
LSQVKGLTLL GFSSLPPQAL LGSEEVNKLN LYSHGIKLTL EGDYFSFLNF VKAVEAMPDK
LYWKRLDYQV ASHPKASIEL ELYTLSINKD FISVAKHD
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