| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3335 |
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| Symbol | |
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| ID | 4019883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3975037 |
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| End bp | 3979698 |
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| Gene Length | 4662 bp |
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| Protein Length | 1553 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957388 |
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| Product | hypothetical protein |
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| Protein accession | YP_564334 |
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| Protein GI | 91794683 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.545908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAATTA ATTATTCACT CAAAACTGAT GTTAGTGGCG CGCACGCTTG GCGAAAAGTG
CTATTGGCTT TGGTTATGTT GACAGGTTTA TTTGGCGTAC CTGCACAGGT AAGCGCCGCG
TGGGATAAGA CTTTTATTGA AGGCATTAAC GCCTATGACA GTAATGCCAC CATAGGTTTT
GCCAATTCGG CTTATCTCTT TAATGCCCCC AATAATGCGA AGTTGCCAGC AATCACAGTG
TTCGATCAGC ATGGTGCCTG TGTAGCAGCT AATGGTAATA ACAAAGCCAA GTCCTGTAAG
GACACCACGC CCTTGGCTGT ACTCCCCAAT GATCGTCTCG CCTTTAGTCA ATGTACTTCT
GCTAGCAGCA CCAATATTGG CCCCCCGAGT TTTTCGACCC CCAGTATCTC TGTGCCTCAA
GGGGAGTACG CTAATGTCAG TTTAAGCGGT GGCAGTGACA AAACACTCAA ATTTACCACC
CCTGATGGCA TCTATAAGCT GAAAAGCCTG TCGGCATCCT CTGGGAGGTT GGAGTTATCC
TCTGGCCAGT ATTGGATAGA AACCTTATCC ATTAATAACG GTGTGACCTT GGTTTTTCCA
GCCAGTGGCA CTGTGACTTT TTTTATTAAA AATAATTATA CCCATCAAGA TCTCAACCTT
ATAGGCGCAC CTGAGCGATT TGTGATCTAC AACTACGGTG ACTTTACTCT TAATGGTAGC
GCCCGTTTAA ATGCTTATGT GGTGGCGCAG GGCACGGCAA CCTTAGAGGG GAGTGCGAGC
TTAACTGGGG CCATCACTTC AAATCAAGTG CGTCTCAATG GTGGCGCTAG TGTGACCTTT
GCCGATACTG TGGCCCGTGT TACCACAGTG CCTAATTGCA CCCTGCCAAC ACCGCCTGCT
GTATTCCATA TGCAATTTGG CCAATCTCTT TCGGGCAGCA ATACTGTATT ATTCGATAAA
CCTTTCGAGG CCGGTGTCAC GCCATTAGTT TTTGCTATGG CGACTGTGTC TAAAACCAAT
AGCAACAGTG ACGGTCCGGC CACAGTAACA ATCAGTAATA TTTCCGCCAC TGGCTTTAGC
TGGACTCAAG TTGAACCGCC ATCCCCAGGT AATCGCTATG TAAAATCTGT GCCTATGCCT
GAAGTGCATT GGATTGCCGT GAGTCCAGGT ACCCATGAGT TGTCTAATGG CACTCAGCTC
ATCGCGGGGA GTGTGCAAAT AAACCAAGCG TTGTTAGGCA GTAATAGCCC CTACACTCAA
GTGACTTTGC CTACTGGGCA AAATGTGGTG CTTAATCAAT TACAAAGTAA AAACAATAAT
TGCTGGTTGA CCAGCACCTC ACAATTTACC GCTAACGGTA TCGAACTTGC GCTCGATAGC
TCAGAAGTGC GCACGGGTAA TACTCGTTGC CAACCAGGTG ATATAAGCCA GTTAAAGAAT
GAAACTCTGG CCTATATGGC GCTGAGCCAA GGCACTGGAA CCATTAACCT CAATGGCGAC
AATGTGAAGT TTCATTTTGG CAATGGCCAG ACTGGAACGG GTTCTTCTGT AATTGATTTG
GCAAACCAAT GTGGCTATAC CACGGCGTTA AGTGGCTTTG ACGGCATACC CACCTTGGTG
GCCGGTAAAA CTTCCAGATA TGGCGGTGAT GGCGGCTGGT TAAGACGTTG CCAGCTAGAC
TCTACAATGA TGAGTATGGT GGTGGATGAA GACACCTATC AGGACAGCGA TCGCAGTCAT
GTATGGGAGA ATTATAGTTT TGTGGCACTG GAGAAAATCA ACGACAGCTT AAGCTGTTTT
AATGATGACT TTAGCCGCAC CGAGATAGGC GATGACTGGG CTCACAAGGT ATTAGGCAGT
TCGTTAGCGC CATCCATCAC TAATGGGCGC CTGCGTTTAA CGTCCGCTAT AGGCAATCAA
GCCACCTCGA GCACTTATCA GCGGCTGTTT CCAGCGGCCG ATAATCTGGT TGAAATTGAA
TTTGATTATT TCGCTTGGTC GAGTCAAGCA GGCACAGGTG CCGATGGCAT AGCAATTATT
TTATCAGATG CCAGCATTAC CCCCCAGCCT GGCAGTTTTG GTGGTGCCTT AGGCTATGCC
CAGCGGGATA ACGGTACCCC AGGTTTTGCC GGTGGCTGGC TGGGTATTGC GCTGGATGAA
TACGGCAATT TCTCTAATGC CAATGAAGGC AAGAGGGATG GCCCAGGTTT TAGGGCACAA
GCCGTGGCCA TTCGCGGCTC GGCCAATACC AGTTATCGCT ACCTTACGGG GACTAATGCC
AACCTGAATC CACGAATAGA TGTGCGCAGT ACGGCCAATG CTGCACCAAA CCATAGATAC
AAGATAGTTA TCGACTCTAG AGTGTCGGGA ACCGCCATGG TTTCTGTGCT ACGTGATACC
CAAAATCGTG GCAACCCTGC CGATTACATC GAGCTGGTGC CCCCCTTTAA TGCGTTAAGC
TTCTCAGGCC AAGCGCCAGT ACCAGACGAT TTCTATGTGT CATTTACCGG TTCTACTGGT
GGCTCTAATA ATAATCATGA GATGGATGAT TTTAAGGTGT GTGCCCTTAA ATCTAAGCCG
GTAGGGGCGC AGGTGCATCA CTTTGAATTT GACTATAGCC TGTCGCCATT GACCTGCAAG
GCGGAAACCA TGACGGTTAG GGCCTGTAAG AATGCGGTGT GCGATTTGTT TACCGATCCC
GTGCGGGCCT CTCTTTCCCC GCACCCCATA GCGAATGGCG GCTGGTACTT TGAAGGCAAT
AATACTAACG CTGTGAGTTT TACCAATGGT TTGGCTCAAG TGGACTTGCG CCACCATGGG
ATAACGCCCA TTACCATAGG GGTGACATCC TCAGATCCAT CCACTGTTGC AGGCAGCGAT
ACCTTGTGTC GTCGTGGCTC GGGATCCTTG TCTAAAGCCA GCTGCAGTAT CAGCTTTGCT
GACAGTGGCT TTGTTTTCGA TGTGCCTGAT AAGTTAGCCA ATAAAGAAAC CGCCGATATC
AGCATCAAGG CGGTGAAAAA ATCTGATACT AGTCAGCAAT GCGTGCCAAG TTTTTCAGGT
GTCTCTAAAA CGCTCAATTT TTGGAGCAGT TACATTAGCC CTAGTACACT CATCAGCCCT
CAGCCTGTCA CTGTCAATGG TAGAGTTATT GGGCAGCAAG CCAATACCGC GACGGCCATA
GGGCTTAATT TTGATGCTAA CGGCGAAAGC AAATTTACAC TTAATTATCC CGATGCAGGT
CAAATTGAGC TGAATGCGAC TTATACCGGC AGCGGCGATG ATGCAGGACT TGTGATGCAG
GGTTCAGATC AATTTGTGAG TTTTCCTGTT GGTTTGTGCA TTACCCCAAA AGAATCCGCA
GCCCTTTGCC CTAACGCCGA TGCCAGCTGC AAGGCCTATA AAGAAGCGGG CAAAGCCTTT
GAGTTAGTCA TCCAAGCTAA GGCTTGGCAG AGAGATGATG ACGATATTGA TAACAACGGT
GATATCAATA AATATTGCGA TAACCTCAAT ACCCCTAATT ATGCCCAAAC TAGCATAGTG
CTGACCCACA ATTTAATTGC ACCTAAAGAT AATCATCTGG GCAGTCTTTC AAACAGTCTT
TACAGCCATG TTGCCGCAAT CAATAACAGT AACACTGTGA GTCAAAGCGT GTCAGAAGTG
GGGGTGTTTA CTTTTAGTGC TGATCCGCCG CGTGAATACT TAGCCTCAAG TTTTTATCAT
ATTCCAACAG CTACGTCAGG CAATATTGGC CGTTTCGTGC CAGCAAGCTT TGAAGTGATC
CAAAGTAGTA TTACAGCAGC CTGCGGCGCG TTCAGCTATA TGGATCAAGG TTTTGGTATT
GGTTACACCC TAGCTGCCAA AAATATCACT GGAGTTACCA CGCAGAATTA TATCGGTGCG
TTCGCTAAGG CATCCATAAG CCTTGCTGGC GAGAATGCCA ATGATGGGGT TGATTTATCA
TCAAGATTAA CCACCCCTAG CATTCCAACT TCGGCTTGGG ATAAAGGTGA GGCGCTAATG
AGTGGCAGTG ATGCCAGCTA TTTTAATCGC CTAAGCGCCC CTCAAGTGGA TGGCCCCTTT
GAATCTTTGG CCATCGGTCT TAAGGTCGAT GACAATGATG GCGGCTTGGC GCTGATTGCT
GCGGCTGATA TGCATGCGGG TTCTACGGCA ATGCCCTGCG GTTCACTCTG TGATGCCAAA
TTACTTGGTC CACTCAATAC CACAACCAAG CTTAGGCATG GGCGCGTGGT GATGGATAAC
ACCTATGGGC CCGAGAGTGA AACCTTGCGC ATGCCGGTTT ATGCTCAGTA TTGGAGCGCC
GGCAACTGGG TGAATAATTT AGCTGATGCT TGCAGCACAT TGTCACCCAC ATTGGATGGC
AGTGAGCAGT ATTCCCCAGC ACTCATCCCA GGACAGACTA TTGTTCGTGG TCCGGCACTA
GTGACGCTAT TCCAAGGGGG TCAAGAGCTC ACTTGGAACA ATGCCGGCAC TGTGGATTAT
CGTGGTGAAG TCAGGGCGCC TTTGACCGTC GCGCCTTGGC TTAAGTGGTA TTGGAATTGG
GACTCTTCGA GCCCAAATAT CCTTGCGGAC CCTCGCGCCA GCGCTTTCTT TGGTCGTTAC
CGTGGTCATG ACAGAATTAT CTACTGGCGT GAGACTCAAT AG
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| Protein sequence | MTINYSLKTD VSGAHAWRKV LLALVMLTGL FGVPAQVSAA WDKTFIEGIN AYDSNATIGF
ANSAYLFNAP NNAKLPAITV FDQHGACVAA NGNNKAKSCK DTTPLAVLPN DRLAFSQCTS
ASSTNIGPPS FSTPSISVPQ GEYANVSLSG GSDKTLKFTT PDGIYKLKSL SASSGRLELS
SGQYWIETLS INNGVTLVFP ASGTVTFFIK NNYTHQDLNL IGAPERFVIY NYGDFTLNGS
ARLNAYVVAQ GTATLEGSAS LTGAITSNQV RLNGGASVTF ADTVARVTTV PNCTLPTPPA
VFHMQFGQSL SGSNTVLFDK PFEAGVTPLV FAMATVSKTN SNSDGPATVT ISNISATGFS
WTQVEPPSPG NRYVKSVPMP EVHWIAVSPG THELSNGTQL IAGSVQINQA LLGSNSPYTQ
VTLPTGQNVV LNQLQSKNNN CWLTSTSQFT ANGIELALDS SEVRTGNTRC QPGDISQLKN
ETLAYMALSQ GTGTINLNGD NVKFHFGNGQ TGTGSSVIDL ANQCGYTTAL SGFDGIPTLV
AGKTSRYGGD GGWLRRCQLD STMMSMVVDE DTYQDSDRSH VWENYSFVAL EKINDSLSCF
NDDFSRTEIG DDWAHKVLGS SLAPSITNGR LRLTSAIGNQ ATSSTYQRLF PAADNLVEIE
FDYFAWSSQA GTGADGIAII LSDASITPQP GSFGGALGYA QRDNGTPGFA GGWLGIALDE
YGNFSNANEG KRDGPGFRAQ AVAIRGSANT SYRYLTGTNA NLNPRIDVRS TANAAPNHRY
KIVIDSRVSG TAMVSVLRDT QNRGNPADYI ELVPPFNALS FSGQAPVPDD FYVSFTGSTG
GSNNNHEMDD FKVCALKSKP VGAQVHHFEF DYSLSPLTCK AETMTVRACK NAVCDLFTDP
VRASLSPHPI ANGGWYFEGN NTNAVSFTNG LAQVDLRHHG ITPITIGVTS SDPSTVAGSD
TLCRRGSGSL SKASCSISFA DSGFVFDVPD KLANKETADI SIKAVKKSDT SQQCVPSFSG
VSKTLNFWSS YISPSTLISP QPVTVNGRVI GQQANTATAI GLNFDANGES KFTLNYPDAG
QIELNATYTG SGDDAGLVMQ GSDQFVSFPV GLCITPKESA ALCPNADASC KAYKEAGKAF
ELVIQAKAWQ RDDDDIDNNG DINKYCDNLN TPNYAQTSIV LTHNLIAPKD NHLGSLSNSL
YSHVAAINNS NTVSQSVSEV GVFTFSADPP REYLASSFYH IPTATSGNIG RFVPASFEVI
QSSITAACGA FSYMDQGFGI GYTLAAKNIT GVTTQNYIGA FAKASISLAG ENANDGVDLS
SRLTTPSIPT SAWDKGEALM SGSDASYFNR LSAPQVDGPF ESLAIGLKVD DNDGGLALIA
AADMHAGSTA MPCGSLCDAK LLGPLNTTTK LRHGRVVMDN TYGPESETLR MPVYAQYWSA
GNWVNNLADA CSTLSPTLDG SEQYSPALIP GQTIVRGPAL VTLFQGGQEL TWNNAGTVDY
RGEVRAPLTV APWLKWYWNW DSSSPNILAD PRASAFFGRY RGHDRIIYWR ETQ
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