| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3328 |
|---|
| Symbol | |
|---|
| ID | 4019876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3965093 |
|---|
| End bp | 3965932 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637957381 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_564327 |
|---|
| Protein GI | 91794676 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAA GTTTATTGCA GTGCCAAAGT AGTCGCGATG TCAGTGCTAA CATTGACTTT
ATTGATGGTC AGCTGGCGCT GTTACCTAGA GAAGCTGATG ACGCTCAGTT AGTGGTGTTG
CCAGAATGCA GTCTGTTATT TGGCGGCCAT GAGAGCCAGC AACTTGAATA TGCAGGCACT
GATGACAACA GCAAGCTTAA AGCGGCACTT GCAGACTTAG CTAAACGGCA TAATGTGTAC
TTAATCGCCG GCACTATTCC TATGCAGGCT CAAGGTGCTA AGGTACATAG CCGTTGCTAC
TTTTTTGATA ATCAAGGAAT AACCTTAGGT CATTACGACA AGCTGCATCT GTTTGATGTG
GACGTGTCAG ACAATACCAA ACAATATCGA GAGAGTGACA GTTTTACGCC AGGAGAGGGG
TTAACCGTTA TCGATACCCC TTTTGGTAAA ATTGGCCTCG CCATCTGTTA TGATCTGCGC
TTCGCTGACT TATTTCGTGC ACTGCGTTTA GCGGGTGCCG ATTTCATCGC CCTGCCATCG
GCATTTACCA AAGTCACAGG GGAAGCTCAC TGGCAAACCT TGTTACAAGC CAGAGCCATT
GAAACCCAGT GTTACTTATT AGGGGCAGGT CAATGGGGCC AGCATAATGA AGGTAGCCGC
GAGACGTGGG GGCAAAGCAT GATAGTCGAC CCTTGGGGGC GCATAGTGTC TCAGCTCGAA
AGCGGTTGTG GTTGGGTGCA GGCCAAACCC GATTTTTTAT TATTAGAGCG CATTCGGCAG
CAAATGCCAG TGCAGGGGCA CAATAGATTT TTGCCCCCAA CACTTATCAA AAAACCTTAA
|
|---|
| Protein sequence | MQISLLQCQS SRDVSANIDF IDGQLALLPR EADDAQLVVL PECSLLFGGH ESQQLEYAGT
DDNSKLKAAL ADLAKRHNVY LIAGTIPMQA QGAKVHSRCY FFDNQGITLG HYDKLHLFDV
DVSDNTKQYR ESDSFTPGEG LTVIDTPFGK IGLAICYDLR FADLFRALRL AGADFIALPS
AFTKVTGEAH WQTLLQARAI ETQCYLLGAG QWGQHNEGSR ETWGQSMIVD PWGRIVSQLE
SGCGWVQAKP DFLLLERIRQ QMPVQGHNRF LPPTLIKKP
|
|---|
| |