Gene Sden_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3320 
Symbol 
ID4019868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3956651 
End bp3957664 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content43% 
IMG OID637957373 
Producthypothetical protein 
Protein accessionYP_564319 
Protein GI91794668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTCTA AGGTTAAATT TCGACTCATT TTTATACTTT TTGCCATTAT AAGCGTCACT 
CTCGGAGTGC ATTGGACTCC TGAAACCTTA ACCACAGAGG TCGATAAGCT AAGCTTAGGC
ATTATTACTG CCGTTTATTT TGCACTATTA CCCTTAGCTT ATTGGTATTG CATCATTAAA
GTCGGTGAGC AAAAACTGTG GAAACTACTG GTTATTTTCA GCTTAAGCAG CTTGATTGCT
CGCCTAAGTT TCCCCGCCGA TATTGCCCAC TATTTTGAAT TTATTGCCTG GCTGCGCTAT
CCCATTATAG GGGTGCTAAT CATCATTGAA ATGTATCTTA TTGTCAGTAT AGTGCGCGGT
TTGCTTAAAG TAAGAAACGT TAACGGCGAT CCCAGAGTCG GCGTGCTAGA GCTTTATGGT
GATGATGAAA AGAAACTCTC TGTTGGATTT ATTCTTGCCA GCGAAGCCAC CAATTGGTAC
TACGCCATTC CTTGGTTTTC CCGTCATCAC CCAGCTGCCA TTAGCTCCAT CAACTTATGG
AGCGCTAAAC CTTGGCACCT ATGCTTAATG CTTAGTAGCT GCCTTTTTGC TTGTATTTCT
AGTTATTTAA TACTGATCAG CTGGAGTCTG CTTGCGGCCA TTATCGTATC TTCAATACTC
AGTCTAAGCC TTGTTATGCT GGTCGCCAAT CATAGGCTCG CTAAGCATTA CTCACTGTAT
TTCCTGCGGA GCAAACTCGT GGTAAACAAT GCTATTTGGG GCTTTATGGC GATTGAACTC
GATAATATCG ACAGCGTAAC AGCAAGCCTT AAGCCTAAAC ACATTGCAGA AGGCGAACTT
ATGCTTGGCA GAGGCGAATA TACCAATATC AGTATCCATT TCAAAAAGCC CCAATGGTAC
TTTGGCGGCC TAGGGCAACT CACTGAGAAA ATTGACACTT TACATTTAAG CGTCAAGAAC
CCCGAAAAAC TTCGCCAAGC GCTCCAAGTA CAAAATGAAG AGCAAGCGGC TTAA
 
Protein sequence
MRSKVKFRLI FILFAIISVT LGVHWTPETL TTEVDKLSLG IITAVYFALL PLAYWYCIIK 
VGEQKLWKLL VIFSLSSLIA RLSFPADIAH YFEFIAWLRY PIIGVLIIIE MYLIVSIVRG
LLKVRNVNGD PRVGVLELYG DDEKKLSVGF ILASEATNWY YAIPWFSRHH PAAISSINLW
SAKPWHLCLM LSSCLFACIS SYLILISWSL LAAIIVSSIL SLSLVMLVAN HRLAKHYSLY
FLRSKLVVNN AIWGFMAIEL DNIDSVTASL KPKHIAEGEL MLGRGEYTNI SIHFKKPQWY
FGGLGQLTEK IDTLHLSVKN PEKLRQALQV QNEEQAA