| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3319 |
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| Symbol | |
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| ID | 4019867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3954575 |
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| End bp | 3956650 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637957372 |
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| Product | transcriptional regulatory protein-like protein |
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| Protein accession | YP_564318 |
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| Protein GI | 91794667 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.389048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTAGTT TTAAATTAGC TGAATACCTA GTGTACCCAG AGCACAATAA ACTGGAGTTG
AATGGTGTAC AGGTTAAAGT TGAACCTAAA ATCATGGAGA TTTTATGTTT TTTAATCCAA
CATCGTGGAC AAGTCATAAG CCGTGAATAC ATTGCTACTA ATCTTTGGCC TAACTCTGTA
GTTGGACTAG ATGTTGTCAC CAGGGCAATA TTTGAACTTA GAAAAGTTTT GAATGATTCA
GCCCAAAACC CAATATTTAT CGAGACCATA GCTAAAAAAG GCTATTGTTT TATTTATGAT
ATTAATAATA AAAATAATAT CAAAACTCAC AAAAAAACAA AAATCAAAAA AAACACTCTC
TATGCAATAT TAACTACCAT GATATTGTTA ACATTGGTCT TCTGGCAAAA AAATCTACTC
ATAACTGATA TTAAAGGAAA TGAAAAATAC CATTCCACAG CTATTACTCA ACCAGACACT
TATTCTAAAA TGCCTAACTT TGGATTATCT AAAAAAATTC TACTTGTACA ATCATCATCA
TCTGAAGACA AACTAAACCA AGTGGTATTA ATTGATTCAG CCACCAATAA AAGAACAGAA
ATAACAAAAA AAGACGCTAA CTACCTCTAT CCTAAATGGG CCAGTAATGG TGAGGAATTA
CTTTACTTAA AATGTAAAAG AGAAAAATGC AAGATTATTA AACACAATAT AAAAACAGGA
TTAATGCACA CTGTCTTATT AAAAGATAAT TATATAATGT CATACGACAT ATCCAAGTCA
AATAAAATCA TTGCAATAAA CTATCTTCAT GAGGGAACCA ACACAATAGA GGTAGTGACA
ATAGATGACA ACAGCTCAAA TAAAACTTTA ATAATACCTA AAGATAAAAA TGAAAATCAT
AGCCTACCAA AATTCAGCTA TAACGATGAA TATTTGTTCT TTGTTAGCAA TATAAAAACA
AGAAATCCAC ACTTAAAAAA ATACAACATG AAAGAGCTAT CTACCCACAG AGTAAACAAA
AATTTTTATT CAATTTTAGA TATAGAACCT CATGGAAAAA ATGAGTTGTT GATTTCGGGG
AAGAAAGATG GCCAATTTTC TATCTGGTCA TTAAATTTAA ACAAGAATAC GTTACTACAA
AACCCGAGCA ACCCCTTGGG TGAGTTTCAA TCTGACTTAT CTTCATCAAA TTTTGATGCA
TCGACAATTG TATATAAAAA TTGGAAAAGA AACATTATCA TTGGCCATTC AGATCTAGGA
GGGAAGATTG AAGTTAGTAA CAGTAATGCT ATCGACATAA ATTCAATTTA CTCTCGAGAG
TTACAAACAT TCTACTTTGT ATCTAATCGT TCAGGTGCGT TTGAGATTTG GAGTTCTCAC
CACGGAGAAA CACAGCAAAT AACACTAGAA AAAGCTAACA GCTTAGGCCA ACCTTTATTA
TCAACTGACT TAAAAAAACT GGCATTTTTG AACAAATCAA ATATTTTAGA GCAACTTATA
ATTTTAAATC TAAAACCTGA AAGTTCTAAC TACAAATATG ATTTTCCTAA AAACTCATAT
TTATTAAACT GGTCAAGCAA TGGTGAAAAT ATAATCTATA GTTATATCTC AGATGGACAA
TACACTTTAT CAAGCTTTAA TATCAAGTCA AACCAACATA CCAAAATAGC CATGAATGCT
GGTATGTATG CAAAAGAACA GACCAAAAAT AATGATCTGA TTTACGTAAA TATGTCATCC
GGGCACTTAA TGAGTCAAAA CAAATATGCT GAGGCTAAAA GTATTGTCAA TCTATTCGAA
TTGAATGCTG AAACGTTCCC AAGAGGACTA ATGCTGACAT CTGATTGGTT GTATTACGTC
GTCAAATACG AGAAAAACTC ACAAGTAATG CGGTATAACT TAAATACTAA GAAAGTAGAA
TTTTTTTATC AATTACCCAA AAACAGTGTG GTAACTCAAA TTGGCGGAGA TGGACACCCG
TTCATTATTT ATGATCATTT AATTGAAGAC AATGCTCAAA TTATTTTATT AGAGCAATCA
CAACAAAATA ATACTCAACT TAACAAGGAT AAATAG
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| Protein sequence | MVSFKLAEYL VYPEHNKLEL NGVQVKVEPK IMEILCFLIQ HRGQVISREY IATNLWPNSV
VGLDVVTRAI FELRKVLNDS AQNPIFIETI AKKGYCFIYD INNKNNIKTH KKTKIKKNTL
YAILTTMILL TLVFWQKNLL ITDIKGNEKY HSTAITQPDT YSKMPNFGLS KKILLVQSSS
SEDKLNQVVL IDSATNKRTE ITKKDANYLY PKWASNGEEL LYLKCKREKC KIIKHNIKTG
LMHTVLLKDN YIMSYDISKS NKIIAINYLH EGTNTIEVVT IDDNSSNKTL IIPKDKNENH
SLPKFSYNDE YLFFVSNIKT RNPHLKKYNM KELSTHRVNK NFYSILDIEP HGKNELLISG
KKDGQFSIWS LNLNKNTLLQ NPSNPLGEFQ SDLSSSNFDA STIVYKNWKR NIIIGHSDLG
GKIEVSNSNA IDINSIYSRE LQTFYFVSNR SGAFEIWSSH HGETQQITLE KANSLGQPLL
STDLKKLAFL NKSNILEQLI ILNLKPESSN YKYDFPKNSY LLNWSSNGEN IIYSYISDGQ
YTLSSFNIKS NQHTKIAMNA GMYAKEQTKN NDLIYVNMSS GHLMSQNKYA EAKSIVNLFE
LNAETFPRGL MLTSDWLYYV VKYEKNSQVM RYNLNTKKVE FFYQLPKNSV VTQIGGDGHP
FIIYDHLIED NAQIILLEQS QQNNTQLNKD K
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