| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3318 |
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| Symbol | |
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| ID | 4019866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3953076 |
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| End bp | 3954446 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637957371 |
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| Product | Integrins alpha chain |
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| Protein accession | YP_564317 |
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| Protein GI | 91794666 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.893609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTA CAATGATAAA AAATAAAGCA AAATTGTTTT TTTTAATTAG CCTCATGGCA
TCGAGCTTAA GTACTGCATC CGTTGCAGAT ATTATTAGCA TTGAGATAGG AGGAAAGGGA
ACAATCAATG CATCTGAAGC GAGTATAACT TGTGATGTAA ATTGCATAAT TGAGAATGAT
CTTCCATTAA ATACTTTGAT AGCAACACCT AAGGATAATG GTAGCTTTTA TGGCTGGACA
GGGCAGATGT GTGATTTTGG TGACCAGCTT ATAGTAAATG AGACTGAATC CATTATCACG
AGAACAACTG GCGGTTCCAA AACATTAGTT AGTGCAGATA TTAATGGAGA TGGGTTTATT
GATCTGGCCT CAATTCAACT TTTTAATGGG AAGGTTACCA CTTTAATAAA TGATGGCTCA
GGTGAATTTA AGCAACATGT AGTAGTGACG AATTTGAATT ATCCTACAGC GTTAGCTTTT
TATGATTGGG ATAATGATGG AGATCAAGAT TTAGCTGTTG CTGAATTTGG AAGTTCAAAA
ATTAAATTAT TTTATAATAA TGGTAATGGG GGGATGGAGT TCAATCGAGA TATTATTATT
GAAGGAGTAA TGCCATATTC AATATCCATT ACAGATATAA ATAGTGATAA GCAGCCTGAT
TTAATTATTT CCTCATTCAC AGCCGATACG AGTGGTGATT TGTTTCAATT AGTCAATAGC
ATAAAAAATG AAAACACTAG CCTTTATGTT AATGATAATA ATAATTTTAC CGTTATGAAT
AAATTGTCAG ATACTGCCGC TATGACACTT GACTCTTATC TTCAGGAAGA TTCTGAAAAA
CTTATTGTTG TTGCTGCAGA AATAATTAAA GGTGACGTTG CACTTTATAC CATAGATAAA
AAGGATGTAA TTAGAACATT GGTTGATTCA GTAGGTGCAA GTTATGGTGT TGCTTTCGGT
GATGTGGATA ACAATGGCTT GATAGATATT CTTGCATCCT ATTATAGGCC ATCAATTTTG
GGACTATATT ACAACCAAGG GAATAATACC TTTTCAGCGA TGCACACTAT AACAAGAAAA
ACTGAGGGAT TAACAGCAAC CTCAATTGCT GATTTTAATA ATGATGGATA TGATGATCTG
GCAACAGGGG AGTTCAATAG TGACAAGTTT TACTATTTCC CAACAAAAAG TTATAAAGAT
TGTATTATAG AAAAAGGGAG TAACATTTCA TTGATGGCAA CCTTTAGCCA GGCTAGTCAA
CCTCAAGAGG TTATCGTGCC TAATTCAGAG TCTGCATCAG GAGGTTCTAT TTCTCTGTTT
ATATTATTAA GTATTTTATC TTGTATGTTT ATTAGAGTGA GATATACGTA A
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| Protein sequence | MDFTMIKNKA KLFFLISLMA SSLSTASVAD IISIEIGGKG TINASEASIT CDVNCIIEND
LPLNTLIATP KDNGSFYGWT GQMCDFGDQL IVNETESIIT RTTGGSKTLV SADINGDGFI
DLASIQLFNG KVTTLINDGS GEFKQHVVVT NLNYPTALAF YDWDNDGDQD LAVAEFGSSK
IKLFYNNGNG GMEFNRDIII EGVMPYSISI TDINSDKQPD LIISSFTADT SGDLFQLVNS
IKNENTSLYV NDNNNFTVMN KLSDTAAMTL DSYLQEDSEK LIVVAAEIIK GDVALYTIDK
KDVIRTLVDS VGASYGVAFG DVDNNGLIDI LASYYRPSIL GLYYNQGNNT FSAMHTITRK
TEGLTATSIA DFNNDGYDDL ATGEFNSDKF YYFPTKSYKD CIIEKGSNIS LMATFSQASQ
PQEVIVPNSE SASGGSISLF ILLSILSCMF IRVRYT
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