Gene Sden_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3308 
Symbol 
ID4019856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3940047 
End bp3940325 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content46% 
IMG OID637957361 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_564307 
Protein GI91794656 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAA CCTCAGCAGC ACTTCACATC TTAGTCAAAC ACCAAACCCA AGCCGAAGAC 
ATCATCAAAC AGCTGCAAAA TGGCGCTAAA TTTGATGTGT TAGCCAAGAA GCACTCGACC
TGCCCCTCGG CCAAAAATGG CGGCAATCTT GGTGAGTTTA AGAAAGGTCA AATGGTGCCA
CAATTCGACA AAGTCTGCTT TAGCGGTGAA TTAATCATCC CCCATCTGGT TAAAACCAAA
TTCGGCTGGC ACGTGATCAA GGTACTCTAT CGCACCTAA
 
Protein sequence
MAKTSAALHI LVKHQTQAED IIKQLQNGAK FDVLAKKHST CPSAKNGGNL GEFKKGQMVP 
QFDKVCFSGE LIIPHLVKTK FGWHVIKVLY RT