Gene Sden_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3289 
Symbol 
ID4019837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3915188 
End bp3916816 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content48% 
IMG OID637957342 
Productendonuclease I 
Protein accessionYP_564288 
Protein GI91794637 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000363328 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTA TGTTGATGAT AAATAAGTCT AAAACAGCAG TGTTCCTAGC ACTGGCAGGC 
TTGGCTTTTA CAGCCAATGC CGAACTGATG ATAAGTGAAG TCCTCTACGA TGCACCGAAT
AATGACACTA CAGAAGAGTT TGTCGAGTTA TTTAATGCAA GCTGCAGTTC AATTGATTTA
AGCCAGTATT CTATCAGTGA TAATGGTGCC AGTTATGGAT TAACGGGTAG CTTAGGGTCT
GGTCAATACC TGACTATCGC TAAAGACGCC GCAGGTTTTA ATAGCCTGTT CGCTCGTCAA
GCCGATTTAT CTCCTATGCC ATTGTCTCTG GGTAATTCAG GTGATTACGT TAAGCTGCTC
AAGGGCACAA CTGAGCTTGA CTTGGTTTCT TGGGAAGGCG GCGTATCAGG TTGGTCATTG
AATGCCACTA ATGTGTCTTT AGTACGTACT ACCAGCACCA ATACTAAATC TCAAGCCGAC
TGGAGTGTGG GCAGCAGTGC CGGTAATCCA GGCCTAGGTA GCTTGACAAC GAGTTGCAGC
ACCCCTCCAC CCGTGACTGA AAACCTCTTG GCTAATGGCC AAGCGGTCAA TAACTTATCA
GCTGCCACCA ATCAAACCTT AAAATTTGTT GCCGATATTC CCTCTGGCGC GACTAACTTA
AGCTTTGCCT TAAGTGGCGG CAGTGGTGAT GCGGATCTTT ATGTGCGTCA AGGCAGTGAG
CCAACGACGA GCGTGTTTGA TTGCCGTCCG TATTTAACCG GTAATAACGA GCAGTGCCCT
ATCACGACGG TAGTGGCCGG GCGTTACTAT GTTAACGTCA CTGCTTACCA AGCCTTTAGT
GGTGCAAGCT TAGTTGCCAA TTACACCCCA GCCAGCTCAG GCGGCACTGG CGGAACGGGA
AATCCAGGTG ATTACGCCTT CGATACCTAT TATGCCAATG CCAGTGGTAA GACAGGGGCG
GCCTTAAAGA GCAGCTTAAA CCTTATCATT CGTGATCATA CCCGCTTTAC CTATGATCAA
GTCTGGGATG GCCTTGGCTA TGCTGATGAA GATCCAGCCA ATACTAACAA TGTGATTTTG
CTCTATACCG GACGTTCGGA GCCTAAGACC AACCGTGCAG GCATGAGTAA TTCACAAGAT
GCTTGGAATC GCGAGCATGT GTGGGCTAAG AGCCACGGCT TCCCTAGCAG TGGTCAGCAT
GCATACACAG ATTTCCATCA CCTGCGTCCT GCCGATGTGT CGGTCAATGG TACTCGTGGC
AATAAAGATT TTGCCATGGG CGGTGTAGCC TTAACTGAAG CTCCAGACAA TAAGACTGAC
AGCGACAGCT TCGAGCCAGC CAATATGGTT AAAGGTGACG TTGCCCGTAT GGTGTTCTAT
ATGGACGTGC GCTATGAAGG CGGTGATAAC AGCGGAACAC CGGATTTATC TGTTGCCAAA
GGCATTACAG GCACAGGTGA AGCACTGTTA GGTGACTTAT GTACTCTGCT TAGCTGGCAT
ATTCAAGATC CCGTCAGTGA TTGGGAGCGT CGTCGTAATA ACCGTATCTA TGAATGGCAG
AAAAACCGTA ATCCCTTCAT CGATAATCCT ATGTGGGCAG AAACGCTTTA CAGCAGCTCA
TGTAACTAA
 
Protein sequence
MRVMLMINKS KTAVFLALAG LAFTANAELM ISEVLYDAPN NDTTEEFVEL FNASCSSIDL 
SQYSISDNGA SYGLTGSLGS GQYLTIAKDA AGFNSLFARQ ADLSPMPLSL GNSGDYVKLL
KGTTELDLVS WEGGVSGWSL NATNVSLVRT TSTNTKSQAD WSVGSSAGNP GLGSLTTSCS
TPPPVTENLL ANGQAVNNLS AATNQTLKFV ADIPSGATNL SFALSGGSGD ADLYVRQGSE
PTTSVFDCRP YLTGNNEQCP ITTVVAGRYY VNVTAYQAFS GASLVANYTP ASSGGTGGTG
NPGDYAFDTY YANASGKTGA ALKSSLNLII RDHTRFTYDQ VWDGLGYADE DPANTNNVIL
LYTGRSEPKT NRAGMSNSQD AWNREHVWAK SHGFPSSGQH AYTDFHHLRP ADVSVNGTRG
NKDFAMGGVA LTEAPDNKTD SDSFEPANMV KGDVARMVFY MDVRYEGGDN SGTPDLSVAK
GITGTGEALL GDLCTLLSWH IQDPVSDWER RRNNRIYEWQ KNRNPFIDNP MWAETLYSSS
CN