| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3289 |
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| Symbol | |
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| ID | 4019837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3915188 |
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| End bp | 3916816 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957342 |
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| Product | endonuclease I |
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| Protein accession | YP_564288 |
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| Protein GI | 91794637 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2356] Endonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000363328 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTTA TGTTGATGAT AAATAAGTCT AAAACAGCAG TGTTCCTAGC ACTGGCAGGC
TTGGCTTTTA CAGCCAATGC CGAACTGATG ATAAGTGAAG TCCTCTACGA TGCACCGAAT
AATGACACTA CAGAAGAGTT TGTCGAGTTA TTTAATGCAA GCTGCAGTTC AATTGATTTA
AGCCAGTATT CTATCAGTGA TAATGGTGCC AGTTATGGAT TAACGGGTAG CTTAGGGTCT
GGTCAATACC TGACTATCGC TAAAGACGCC GCAGGTTTTA ATAGCCTGTT CGCTCGTCAA
GCCGATTTAT CTCCTATGCC ATTGTCTCTG GGTAATTCAG GTGATTACGT TAAGCTGCTC
AAGGGCACAA CTGAGCTTGA CTTGGTTTCT TGGGAAGGCG GCGTATCAGG TTGGTCATTG
AATGCCACTA ATGTGTCTTT AGTACGTACT ACCAGCACCA ATACTAAATC TCAAGCCGAC
TGGAGTGTGG GCAGCAGTGC CGGTAATCCA GGCCTAGGTA GCTTGACAAC GAGTTGCAGC
ACCCCTCCAC CCGTGACTGA AAACCTCTTG GCTAATGGCC AAGCGGTCAA TAACTTATCA
GCTGCCACCA ATCAAACCTT AAAATTTGTT GCCGATATTC CCTCTGGCGC GACTAACTTA
AGCTTTGCCT TAAGTGGCGG CAGTGGTGAT GCGGATCTTT ATGTGCGTCA AGGCAGTGAG
CCAACGACGA GCGTGTTTGA TTGCCGTCCG TATTTAACCG GTAATAACGA GCAGTGCCCT
ATCACGACGG TAGTGGCCGG GCGTTACTAT GTTAACGTCA CTGCTTACCA AGCCTTTAGT
GGTGCAAGCT TAGTTGCCAA TTACACCCCA GCCAGCTCAG GCGGCACTGG CGGAACGGGA
AATCCAGGTG ATTACGCCTT CGATACCTAT TATGCCAATG CCAGTGGTAA GACAGGGGCG
GCCTTAAAGA GCAGCTTAAA CCTTATCATT CGTGATCATA CCCGCTTTAC CTATGATCAA
GTCTGGGATG GCCTTGGCTA TGCTGATGAA GATCCAGCCA ATACTAACAA TGTGATTTTG
CTCTATACCG GACGTTCGGA GCCTAAGACC AACCGTGCAG GCATGAGTAA TTCACAAGAT
GCTTGGAATC GCGAGCATGT GTGGGCTAAG AGCCACGGCT TCCCTAGCAG TGGTCAGCAT
GCATACACAG ATTTCCATCA CCTGCGTCCT GCCGATGTGT CGGTCAATGG TACTCGTGGC
AATAAAGATT TTGCCATGGG CGGTGTAGCC TTAACTGAAG CTCCAGACAA TAAGACTGAC
AGCGACAGCT TCGAGCCAGC CAATATGGTT AAAGGTGACG TTGCCCGTAT GGTGTTCTAT
ATGGACGTGC GCTATGAAGG CGGTGATAAC AGCGGAACAC CGGATTTATC TGTTGCCAAA
GGCATTACAG GCACAGGTGA AGCACTGTTA GGTGACTTAT GTACTCTGCT TAGCTGGCAT
ATTCAAGATC CCGTCAGTGA TTGGGAGCGT CGTCGTAATA ACCGTATCTA TGAATGGCAG
AAAAACCGTA ATCCCTTCAT CGATAATCCT ATGTGGGCAG AAACGCTTTA CAGCAGCTCA
TGTAACTAA
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| Protein sequence | MRVMLMINKS KTAVFLALAG LAFTANAELM ISEVLYDAPN NDTTEEFVEL FNASCSSIDL
SQYSISDNGA SYGLTGSLGS GQYLTIAKDA AGFNSLFARQ ADLSPMPLSL GNSGDYVKLL
KGTTELDLVS WEGGVSGWSL NATNVSLVRT TSTNTKSQAD WSVGSSAGNP GLGSLTTSCS
TPPPVTENLL ANGQAVNNLS AATNQTLKFV ADIPSGATNL SFALSGGSGD ADLYVRQGSE
PTTSVFDCRP YLTGNNEQCP ITTVVAGRYY VNVTAYQAFS GASLVANYTP ASSGGTGGTG
NPGDYAFDTY YANASGKTGA ALKSSLNLII RDHTRFTYDQ VWDGLGYADE DPANTNNVIL
LYTGRSEPKT NRAGMSNSQD AWNREHVWAK SHGFPSSGQH AYTDFHHLRP ADVSVNGTRG
NKDFAMGGVA LTEAPDNKTD SDSFEPANMV KGDVARMVFY MDVRYEGGDN SGTPDLSVAK
GITGTGEALL GDLCTLLSWH IQDPVSDWER RRNNRIYEWQ KNRNPFIDNP MWAETLYSSS
CN
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