Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3226 |
Symbol | |
ID | 4019755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3861878 |
End bp | 3862621 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957279 |
Product | hypothetical protein |
Protein accession | YP_564225 |
Protein GI | 91794574 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000725415 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCATT TAAGAAAAAC TTTACTTGCC GCCGCCTGTT TAATGGCGGT TTCTAGCGCG GCTCACAGTG ATACCTTTGC CGGTTTTAAA GTGGGTGGTG ACTATTGGCA CAGCGATGCC AGTGGTTATT TCGCCGATGA TAGCGGTGCT AAGGTCAACA GCGATTTAGA CGCCGATGCC CAAGGTAGCC TTTGGTTTGC TGTTGAGCAC ATGCTGCCAT TTGTGCCTAA TCTAAAAATT CGTGAAAACC GTGTTTCTGC CACCTCGAGC CTAGACAATG CTGACTTTAA CTTTAATGGT CATGGGTTTT CTGGCAAGGT CGGCATAGAT AACAAGCTAA ACAATACAGA TTTTGTGCTG TATTACGAGC TACTGGACAG TGATTTGGCC GAGCTTGATG TGGGCGGCGC CTACAAGATG ATGAATGGTT CGCTGCGGGT AAGTGATGCC GGTTACCCTG AGCAAATTGA TATCGACAGT GGCATTGCCA TGGGTTACGC CAGCGGACAA GTGGGTGTGC CTGGTATGGG GTTATACGCT TTTGCCGAGT TGCTACACGG CGTCAGTGAA TCAAATGTGC ACGATTACTC AGTGGGCCTA GGTTGGGTAT TTGATGGGCT AGTTGTCGAT ACTAAAGTGC GTGTCGGTTA CCGTGATATG AGTTTTGATG TCAGCCGCTT TTCTGGCATG ACACAAGATA CTCAGCTTAG CGGCGTGTTT GCTGGTGTTG AATTAGACTT TTAA
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Protein sequence | MLHLRKTLLA AACLMAVSSA AHSDTFAGFK VGGDYWHSDA SGYFADDSGA KVNSDLDADA QGSLWFAVEH MLPFVPNLKI RENRVSATSS LDNADFNFNG HGFSGKVGID NKLNNTDFVL YYELLDSDLA ELDVGGAYKM MNGSLRVSDA GYPEQIDIDS GIAMGYASGQ VGVPGMGLYA FAELLHGVSE SNVHDYSVGL GWVFDGLVVD TKVRVGYRDM SFDVSRFSGM TQDTQLSGVF AGVELDF
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