| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3224 |
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| Symbol | |
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| ID | 4019753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3859298 |
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| End bp | 3859921 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957277 |
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| Product | nucleoside diphosphate pyrophosphatase |
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| Protein accession | YP_564223 |
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| Protein GI | 91794572 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000886574 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAGG CGCCACAATT AACTGAGCTT AATGGTCAAG ATGATGTCGA ATTACTTGAT
GTTAAGGTCA TATACCAAGG TTTCTTTCGC ATGGATGAAT ATCGCTTTAA ACATCGTTTG
TTTGATGGCA ACTGGAGTGC CGAGATTAAG CGTGAGGTAT TTGACCGTGG TCATGCTGTG
GCGGTGCTGC CTTACGATCC TGTCACTGAC CAAGTGGTGC TGATTGAGCA AATACGCATT
CCTGCATTAG CAACCACTAA ATTAATTTGG CTTCTTGAGC TAGTGGCGGG TATGATTGCG
CCCGGAGAAT CACCCTGTGA AGTAGCGACA AGAGAGCTGT TTGAAGAGAC AGGCCTAAAG
GCAAAGCAGC TGTATAAAGT CAGCTCTTAT CTTGCAAGCC CAGGTGGTTC CACTGAGCGA
TTTTATTTTT ATTGGGCTCA AGTCGATGCC AGTCAAGCCA GTGGCATCCA CGGCCTTGAA
GCGGAAAATG AAGATATTCG TGTGCGAGTG TTAACTCGAC AACACGCACT AGACTTATTA
GAGCAAGGCT TGGTCGATAA TGCTGCCACA GTCATAGGCT TGCAATGGTT GGCGTTGAAT
CAACATAAGC TGACGAGTAT CTGA
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| Protein sequence | MSQAPQLTEL NGQDDVELLD VKVIYQGFFR MDEYRFKHRL FDGNWSAEIK REVFDRGHAV
AVLPYDPVTD QVVLIEQIRI PALATTKLIW LLELVAGMIA PGESPCEVAT RELFEETGLK
AKQLYKVSSY LASPGGSTER FYFYWAQVDA SQASGIHGLE AENEDIRVRV LTRQHALDLL
EQGLVDNAAT VIGLQWLALN QHKLTSI
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