| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3214 |
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| Symbol | psd |
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| ID | 4019743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3848920 |
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| End bp | 3849789 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957267 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_564213 |
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| Protein GI | 91794562 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0842821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACTCAG TAAAAATTGC ATTGCAATAC ATAATGCCAA AACACTTAGT GTCTCGCCTT
GTGGGTAAAT TTGCCGCTGC CAAAGCAGGC GCCCTAACCC AAGCCTTTAT TAACTGGTTT
ATCAAGCAAT ATAAAGTTGA TATGTCAGAA GCGGCACAGA GCGATCCTAA AGCCTATGCT
AGTTTTAATG ATTTTTTCAC CCGCGCCTTA AAAGATGGCA TTCGGCCACT TTGCCAAGAA
GACGGCATCA TGGTGCATCC CGTTGATGGC GCGGTAAGTC AACGCGGCCC CATTGAAGCA
GGTCAAATCG TGCAGGCTAA AGGTCATCAT TATTCATCGG TTGCGCTATT AGGCGGCGAT
GAAAAAGATG CCGCCCGTTT CGACAACGGC GACTTCGCCA CTATCTACTT AGCACCTAAA
GATTATCATA GGATCCATAT GCCAATCACT GGCACCCTGT CTAAGATGAT TTATGTCCCA
GGTGAGCTAT TTTCGGTTAA CCCATTAACG GCGCAAAATG TGCCAGGGTT GTTTGCCCGT
AACGAGCGCG TGGTGGCGAT TTTTGAAACC CAAGTCGGCC CACTTGCCAT GGTGCTGGTT
GGTGCAACCA TAGTTGCCAG CATAGAAACT GTGTGGGCTG GCACTGTGAC GCCGCCTGCG
GGTAAGCAAG TCTTTACTTG GGAATACCCA ACAACAGGTA GCGATGCCCT AACCTTAGAA
AAAGGCGCCG AAATGGGCCG CTTCAAACTG GGTAGCACAG TGGTGATGTT ATTCGCCCAA
GATGCAATCG ACACATTCGC CGCTGGCGTT GACCCAGGCG AGACCACTCG CATGGGCCAA
AAATTTGCCA ATCTAAATAA AAGTAAGTAG
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| Protein sequence | MDSVKIALQY IMPKHLVSRL VGKFAAAKAG ALTQAFINWF IKQYKVDMSE AAQSDPKAYA
SFNDFFTRAL KDGIRPLCQE DGIMVHPVDG AVSQRGPIEA GQIVQAKGHH YSSVALLGGD
EKDAARFDNG DFATIYLAPK DYHRIHMPIT GTLSKMIYVP GELFSVNPLT AQNVPGLFAR
NERVVAIFET QVGPLAMVLV GATIVASIET VWAGTVTPPA GKQVFTWEYP TTGSDALTLE
KGAEMGRFKL GSTVVMLFAQ DAIDTFAAGV DPGETTRMGQ KFANLNKSK
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