| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3208 |
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| Symbol | |
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| ID | 4019734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3842470 |
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| End bp | 3843837 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957258 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_564207 |
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| Protein GI | 91794556 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000058641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCATA GCATTATCTT CACCCAAGTC TTATTCAGCA TATTATTGAG CGTGGCCAGT
GTAGCGGCTT GGGCCAGTAA TAAGCTCGAC AGCGTGCGTA TATGGGCAGC CCCTGAGTCT
ACTCGAGTTG TTTTTGACTT GACTCAAGCC CCTAGGTACG CAGACTTTAC CCTGAGTAGC
CCCCATAGGT TAGTGGTGGA TTTAGAGGAT ACTCACCTTG GGGTTAATTT AGCGAAAGTT
GCCAATAACA GTAAGTTAAT CAAGAGTATT CGTTATAGCA CCCCCCCAAA AAAAGGCACC
TTGCGTTTAG TGCTTGATTT ACACAAACCT GTAAAAGCTA ATTTGTTTTC ACTGCCACCC
ACGGCGCCCT ATGGCAATCG TTTGGTGGTG GACTTAGATG ACTCAGCATC CGCGCAGTCT
GCAAGCTCGA GTTCAAGCAG TTCAACCCCA AGTAATTTTG CTGCATCTAG CCAAGGCTTA
AGAGATTTAG TTATTGCCAT TGATGCGGGG CACGGCGGTG AAGACCCCGG CTCCATTGGG
CCTTCTGGTA CCCATGAAAA ACGCGTGGTA CTGGAAATTG CCAACCGTTT AGCGGCCAAA
ATTAATCAAA CACCAGGCAT GCGCGCCGTT ATGACGCGTC GAGGCGATTA TTTTGTTAAC
TTGAATAAGC GCTCCGAGCT TGCCCGTAAT AGTAAAGCCG ACTTGCTTAT TTCAATTCAT
GCCGATGCAT TTACCTCCCC TAAGCCCCAA GGTGCTTCGG TGTGGATATT GTCAATGCGC
CGCGCCAACA GTGAAATTGG TCGTTGGCTC GAGCAAAAAG AAAAACACTC AGAGCTGCTG
GGCGGCGCCG GTGAAATTAT TCAAAATACC GATAGCGAAC AGTATTTGGC GATGACCTTG
CTGGACATGT CGATGAATAG CTCCATGGCC ATTAGTCATG CAATCGCTGG CGATATCATA
AAAGACTTAA ACTCAGTGAC TAAGCTGCAT AAGCATAAAC CTGAGGCGGC AAGTTTTGCC
GTGCTTAAAT CTCCGGATAT TCCGTCTATT TTGGTAGAAA CAGGCTTTAT CTCTAATCCC
TATGAAGAGC GACAGCTTAA AAGTGGGGTA TATCAGGATA AACTAGCCAG AGCGATACAT
TCAGGCGTGC TGAGGTATTT TTCCACTAAT GCCCCAAGTG ATACCGTTCT TGCCAAAAGG
GGCGTAAGTA CCAGTACGAG TAGCCAAAAA CACAAGGTTG CCCGTGGGGA GTCGCTCTCT
GTGATTGCTC AGCGCTATCA AGTGTCTGTC ACCCGACTTA AGCAGGCGAA TAATCTTAGG
TCCGATGTGG TGCACGTTGG CCAAGATCTT GTGATCCCAA GGGCTTAG
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| Protein sequence | MNHSIIFTQV LFSILLSVAS VAAWASNKLD SVRIWAAPES TRVVFDLTQA PRYADFTLSS
PHRLVVDLED THLGVNLAKV ANNSKLIKSI RYSTPPKKGT LRLVLDLHKP VKANLFSLPP
TAPYGNRLVV DLDDSASAQS ASSSSSSSTP SNFAASSQGL RDLVIAIDAG HGGEDPGSIG
PSGTHEKRVV LEIANRLAAK INQTPGMRAV MTRRGDYFVN LNKRSELARN SKADLLISIH
ADAFTSPKPQ GASVWILSMR RANSEIGRWL EQKEKHSELL GGAGEIIQNT DSEQYLAMTL
LDMSMNSSMA ISHAIAGDII KDLNSVTKLH KHKPEAASFA VLKSPDIPSI LVETGFISNP
YEERQLKSGV YQDKLARAIH SGVLRYFSTN APSDTVLAKR GVSTSTSSQK HKVARGESLS
VIAQRYQVSV TRLKQANNLR SDVVHVGQDL VIPRA
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