Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3207 |
Symbol | mutL |
ID | 4019733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3840466 |
End bp | 3842463 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957257 |
Product | DNA mismatch repair protein |
Protein accession | YP_564206 |
Protein GI | 91794555 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000351816 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAATTC ATATCCTACC GCCTCAACTT GCCAACCAAA TCGCCGCTGG CGAAGTGGTG GAAAGACCCG CGTCTGTGGT GAAAGAGTTG GTGGAAAATA GCTTGGATGC CGGTGCCACT CGGGTCGATA TCGACATAGA CAAGGGCGGC AGCAAACTTA TCCGCATCCG AGATAACGGC TCAGGCATAC CTAAAGATGA GTTGGCCTTA GCGCTATCGC GTCACGCGAC CTCGAAAGTG CACAGCCTAG ATGATTTAGA AGCCATTTTA AGCTTTGGTT TTCGTGGAGA AGCCTTGGCC AGTATTAGTT CTGTGGCACG CCTGACCTTA ACCTCTAAAA CGGCTGAACA AACTGAAGCA TGGCAAGCCC ATGCCGAAGG CTCGCAAATG GATGTGAGCC TGATGCCCGC GGCCCATCCA CAGGGCAGCA CTATAGAAGT GGTGGATTTG TTTTTTAACA CTCCGGCCAG AAGGCGTTTC CTAAAGAGTG ATAAAACTGA GTTTACTCAT ATCGATGAAT GGCTCAAGCG TATCGCCATA GTGCGTACGG ATATCCACTT TAGTTTGACT CACAATGGTA AGCTAGTGCG TCAATATCGG GCGGCGAATA CCGACATTCA AATGCAGCAA AGGTTGTCGC AAATTTGTGG CCGCGCCTTT GCTGAGCAAG CCATTACCTT GGCCTGTGAA CATGATGGCC TATCCCTTGA AGGTTACATT CAGTCACCCC ATGACAATAG CGTGACCGAC ACCAACTACT TTTATGTTAA TGGCCGCCTA GTGAGGGATA AACTGGTCAA TCATGCAGTG CGCCAAGCGT TTGCCGAGCA TCAGTGGCAT CAACAGCCTT CATATGTGCT CAAACTCACC TTAGACCCGC ATCAAGTCGA TGTGAATGTG CATCCGGCTA AGCATGAAGT GCGCTTTCAT CAAAGCCGTT ATGTGCATGA CTTTATTCTG CAGGCGCTGC AATCGGCTTT AGCTCAGTTT CCCGCTAAAG GCAGTCAGGC TGAATATGAC TTTGAACAAG ATAATGGGTC TTTGGAGGCC ACGGCCGCTT CGAATCCAGA TAATGGATTA AGCCCGAGTC GTGGTCATGC AGAAGAGGGC GATTTTTCGA ATTCAGTCGC TTATGCTGCG AATGCAGCTT CAGTGCACCG AGGATCTACA AGCTCTGAAC GTAAGGCCAG CGCCGGGGTC AGTCAATTTG GCCGTATTCC CTCATCTCAA GGTGATTATC AGCCTCAAGA TAATAGTCGT TATACACCTA AGCGTTATTC AACAAACGCC GCTTCAACTA ATACGGCTTC AAATTACAGT CATTCAACGT CTGCACCAGT GTCTCGTCAG GCACTTGAGG GTTATGCTCA GTTATTAGCG ACACCAGAGA TAGTGTCTTC TTCAAACCAG TATGTGGCGG ATAAAAATCA AGAATTCAAA GACGTCAATG AGTCTGGTTC GACCCCAAAG GTTGCCGCTA TGCCTGCGGT GCTTGCTGGG CAATATTGGG TAATCACTCA AGGAGAGTGT TTACGCTTAT TACCGCTACA GGCGGTGCGT TTGTGGCTAA GGCAAAAAGA AATCAGTCAC AAGCTACCAA CAGGACTTGT GAGCCAACCA TTACTTATGC CGGTTGCGGT AAAAGCCGAT AAACATTGGG GCGAAATCTT GCTTGAAAGA GAGTCTTTAC TCAGACAATT GGGTTTAGAG CTGACAATTC GCTACCAGCA GTTGATTATT AAGAAAGTGC CCCCATATTT GAGAGAGAGC CAGTTAGCTG TGTTGATCCC CGAGTTATTG CAATGGGTAG AACACCAAGT GCCGGCAATA CCAGCATTAA GTGCCTGGCT TGCAAAACAC GGGCAGAAGC ATGAACAAAG CTTAACAGAC ACCTGGGAAG GTTTTTGTTT ATTATCAGAG CCTGAGCAGC AAGTGCTGCT AGAAAAGGCA AAAGTATTGC CTTGGCAAGC ATGGTTAGAA GAGAGTCAGA GTGAATAA
|
Protein sequence | MPIHILPPQL ANQIAAGEVV ERPASVVKEL VENSLDAGAT RVDIDIDKGG SKLIRIRDNG SGIPKDELAL ALSRHATSKV HSLDDLEAIL SFGFRGEALA SISSVARLTL TSKTAEQTEA WQAHAEGSQM DVSLMPAAHP QGSTIEVVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAI VRTDIHFSLT HNGKLVRQYR AANTDIQMQQ RLSQICGRAF AEQAITLACE HDGLSLEGYI QSPHDNSVTD TNYFYVNGRL VRDKLVNHAV RQAFAEHQWH QQPSYVLKLT LDPHQVDVNV HPAKHEVRFH QSRYVHDFIL QALQSALAQF PAKGSQAEYD FEQDNGSLEA TAASNPDNGL SPSRGHAEEG DFSNSVAYAA NAASVHRGST SSERKASAGV SQFGRIPSSQ GDYQPQDNSR YTPKRYSTNA ASTNTASNYS HSTSAPVSRQ ALEGYAQLLA TPEIVSSSNQ YVADKNQEFK DVNESGSTPK VAAMPAVLAG QYWVITQGEC LRLLPLQAVR LWLRQKEISH KLPTGLVSQP LLMPVAVKAD KHWGEILLER ESLLRQLGLE LTIRYQQLII KKVPPYLRES QLAVLIPELL QWVEHQVPAI PALSAWLAKH GQKHEQSLTD TWEGFCLLSE PEQQVLLEKA KVLPWQAWLE ESQSE
|
| |