Gene Sden_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3207 
SymbolmutL 
ID4019733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3840466 
End bp3842463 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content48% 
IMG OID637957257 
ProductDNA mismatch repair protein 
Protein accessionYP_564206 
Protein GI91794555 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000351816 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTC ATATCCTACC GCCTCAACTT GCCAACCAAA TCGCCGCTGG CGAAGTGGTG 
GAAAGACCCG CGTCTGTGGT GAAAGAGTTG GTGGAAAATA GCTTGGATGC CGGTGCCACT
CGGGTCGATA TCGACATAGA CAAGGGCGGC AGCAAACTTA TCCGCATCCG AGATAACGGC
TCAGGCATAC CTAAAGATGA GTTGGCCTTA GCGCTATCGC GTCACGCGAC CTCGAAAGTG
CACAGCCTAG ATGATTTAGA AGCCATTTTA AGCTTTGGTT TTCGTGGAGA AGCCTTGGCC
AGTATTAGTT CTGTGGCACG CCTGACCTTA ACCTCTAAAA CGGCTGAACA AACTGAAGCA
TGGCAAGCCC ATGCCGAAGG CTCGCAAATG GATGTGAGCC TGATGCCCGC GGCCCATCCA
CAGGGCAGCA CTATAGAAGT GGTGGATTTG TTTTTTAACA CTCCGGCCAG AAGGCGTTTC
CTAAAGAGTG ATAAAACTGA GTTTACTCAT ATCGATGAAT GGCTCAAGCG TATCGCCATA
GTGCGTACGG ATATCCACTT TAGTTTGACT CACAATGGTA AGCTAGTGCG TCAATATCGG
GCGGCGAATA CCGACATTCA AATGCAGCAA AGGTTGTCGC AAATTTGTGG CCGCGCCTTT
GCTGAGCAAG CCATTACCTT GGCCTGTGAA CATGATGGCC TATCCCTTGA AGGTTACATT
CAGTCACCCC ATGACAATAG CGTGACCGAC ACCAACTACT TTTATGTTAA TGGCCGCCTA
GTGAGGGATA AACTGGTCAA TCATGCAGTG CGCCAAGCGT TTGCCGAGCA TCAGTGGCAT
CAACAGCCTT CATATGTGCT CAAACTCACC TTAGACCCGC ATCAAGTCGA TGTGAATGTG
CATCCGGCTA AGCATGAAGT GCGCTTTCAT CAAAGCCGTT ATGTGCATGA CTTTATTCTG
CAGGCGCTGC AATCGGCTTT AGCTCAGTTT CCCGCTAAAG GCAGTCAGGC TGAATATGAC
TTTGAACAAG ATAATGGGTC TTTGGAGGCC ACGGCCGCTT CGAATCCAGA TAATGGATTA
AGCCCGAGTC GTGGTCATGC AGAAGAGGGC GATTTTTCGA ATTCAGTCGC TTATGCTGCG
AATGCAGCTT CAGTGCACCG AGGATCTACA AGCTCTGAAC GTAAGGCCAG CGCCGGGGTC
AGTCAATTTG GCCGTATTCC CTCATCTCAA GGTGATTATC AGCCTCAAGA TAATAGTCGT
TATACACCTA AGCGTTATTC AACAAACGCC GCTTCAACTA ATACGGCTTC AAATTACAGT
CATTCAACGT CTGCACCAGT GTCTCGTCAG GCACTTGAGG GTTATGCTCA GTTATTAGCG
ACACCAGAGA TAGTGTCTTC TTCAAACCAG TATGTGGCGG ATAAAAATCA AGAATTCAAA
GACGTCAATG AGTCTGGTTC GACCCCAAAG GTTGCCGCTA TGCCTGCGGT GCTTGCTGGG
CAATATTGGG TAATCACTCA AGGAGAGTGT TTACGCTTAT TACCGCTACA GGCGGTGCGT
TTGTGGCTAA GGCAAAAAGA AATCAGTCAC AAGCTACCAA CAGGACTTGT GAGCCAACCA
TTACTTATGC CGGTTGCGGT AAAAGCCGAT AAACATTGGG GCGAAATCTT GCTTGAAAGA
GAGTCTTTAC TCAGACAATT GGGTTTAGAG CTGACAATTC GCTACCAGCA GTTGATTATT
AAGAAAGTGC CCCCATATTT GAGAGAGAGC CAGTTAGCTG TGTTGATCCC CGAGTTATTG
CAATGGGTAG AACACCAAGT GCCGGCAATA CCAGCATTAA GTGCCTGGCT TGCAAAACAC
GGGCAGAAGC ATGAACAAAG CTTAACAGAC ACCTGGGAAG GTTTTTGTTT ATTATCAGAG
CCTGAGCAGC AAGTGCTGCT AGAAAAGGCA AAAGTATTGC CTTGGCAAGC ATGGTTAGAA
GAGAGTCAGA GTGAATAA
 
Protein sequence
MPIHILPPQL ANQIAAGEVV ERPASVVKEL VENSLDAGAT RVDIDIDKGG SKLIRIRDNG 
SGIPKDELAL ALSRHATSKV HSLDDLEAIL SFGFRGEALA SISSVARLTL TSKTAEQTEA
WQAHAEGSQM DVSLMPAAHP QGSTIEVVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAI
VRTDIHFSLT HNGKLVRQYR AANTDIQMQQ RLSQICGRAF AEQAITLACE HDGLSLEGYI
QSPHDNSVTD TNYFYVNGRL VRDKLVNHAV RQAFAEHQWH QQPSYVLKLT LDPHQVDVNV
HPAKHEVRFH QSRYVHDFIL QALQSALAQF PAKGSQAEYD FEQDNGSLEA TAASNPDNGL
SPSRGHAEEG DFSNSVAYAA NAASVHRGST SSERKASAGV SQFGRIPSSQ GDYQPQDNSR
YTPKRYSTNA ASTNTASNYS HSTSAPVSRQ ALEGYAQLLA TPEIVSSSNQ YVADKNQEFK
DVNESGSTPK VAAMPAVLAG QYWVITQGEC LRLLPLQAVR LWLRQKEISH KLPTGLVSQP
LLMPVAVKAD KHWGEILLER ESLLRQLGLE LTIRYQQLII KKVPPYLRES QLAVLIPELL
QWVEHQVPAI PALSAWLAKH GQKHEQSLTD TWEGFCLLSE PEQQVLLEKA KVLPWQAWLE
ESQSE