Gene Sden_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3199 
Symbol 
ID4019725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3832819 
End bp3833514 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content45% 
IMG OID637957249 
Productcytochrome c1 
Protein accessionYP_564198 
Protein GI91794547 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.663491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TACTTATTGC TTTAGTGACT CTGTTACCAA GCTTAGCTAT GGCTGCTGGC 
GGCAACGTTC ACTTAGAAGA TGCCAATGTC GACTTACACG ACACTGAATC ATTGCAACGC 
GGTTTAGGAC TGTTCCAGAA CTATTGTTCT GGTTGTCACA GCACTCAGTA TCAAAGATAT 
GAGCGCGTGG CCACAGACTT GAACATTCCT GCTGATGAAA TGCGCAAAAA CTATATGTTT 
ACCGATGCTA AAATTGGTGA ACTAATGGAA AATGCCATTC CTACAGCGGA TGCTGCCAAC 
TGGTTTGGCG CAGCACCACC GGATTTGACT TTGGTTGCTC GCGTTCGTGG TGAAGACTGG 
GTTTACTCAT ACCTTAAGGG CTTCTATAAA GATGAGAGCC GTCCTTTTGG AGTGAATAAT 
ACAGTATTCC CTTTGGTGGG TATGCCGCAC GTGCTTGAAG ACTTGCAAGG CTTAGCCGTT 
AAGCAAGAAG ACGGCACCTT TGTAGTTTCA GGTGGCAAGT TAACCGCTGA AGAATACGAT 
CAAGCAGTAC GTGATATCAC GGGTTTCTTG GTTTATTCGG CTGAGCCTGT GAAGCTTGAA 
CGCAAGGCTA TGGGTGTGTG GGTGCTTGGA TTCCTGTTTA TTTTCTTCAT CATTGCTTAC 
TTGTTGAAGA AAGAATACTG GAAAGATGTG CACTAG
 
Protein sequence
MKKLLIALVT LLPSLAMAAG GNVHLEDANV DLHDTESLQR GLGLFQNYCS GCHSTQYQRY 
ERVATDLNIP ADEMRKNYMF TDAKIGELME NAIPTADAAN WFGAAPPDLT LVARVRGEDW 
VYSYLKGFYK DESRPFGVNN TVFPLVGMPH VLEDLQGLAV KQEDGTFVVS GGKLTAEEYD 
QAVRDITGFL VYSAEPVKLE RKAMGVWVLG FLFIFFIIAY LLKKEYWKDV H