| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3193 |
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| Symbol | argD |
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| ID | 4019719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3825624 |
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| End bp | 3826841 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957243 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_564192 |
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| Protein GI | 91794541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTG AAATGAAACT AAATCGTGCC CAGTTTGATG AAGTAATGGT GCCTAACTAT
GCACCCTCTA CCGTGATCCC TGTACGTGGT GAAGGTAGCC GAGTGTGGGA CCAAGAAGGC
ACTGAATTTG TCGATTTTGC CGGCGGTATT GCGGTTAACT GCTTAGGTCA TTGTCATCCA
GCCCTAGTTG GTGCACTCAA AACTCAAGGC GAAAAGCTGT GGCATTTGTC TAATGTAATG
ACTAACGAGC CCGCACTTGA ATTAGCAACC AAACTAGTCA ATGCAACATT TGCCGAGCGC
GTCTATTTTG CTAACTCAGG TGCAGAAGCC AACGAAGCGG CACTTAAACT TGCCCGCCGT
TATGCCCTAG AAAATCATGG CGCTGACAAA GATCAAATTA TCGCCTTCGA TAAAGCCTTC
CACGGCCGTA CTTTCTTCAC TGTGACTGTC GGTGGTCAAG CGGCTTACTC TGATGGGTTT
GGTCCTAAGC CTCAAAGCAT TACCCATGTG CCGTTCAATG ATATTAAGGC CTTAGAAGCT
GTAATATCAG ACAAGACCTG CGCCATTATG TTGGAACCAT TACAAGGCGA AGGCGGCATT
ATCAATGGCG ACCCAGAGTT TTTAAAAGCG GTTCGCGCCT TGGCTGATAA ACACGATGCC
TTAGTGATTT TTGATGAAGT ACAAACGGGT GTCGGTCGTA CTGGCGATTT ATTCGCTTAT
ATGGCAACTG ATATAGTGCC AGATATTTTA ACTAGCGCTA AAGCCTTAGG CGGCGGTTTC
CCAATCGCGG CTATGTTAAC TACGGCTAAA GTTGCTGCTC ATCTAAAAGT CGGCACTCAT
GGTTCTACTT ATGGTGGCAA CCCTTTGGCC TGTGCTATCG GTAATGCTGT GTTAGATGTA
GTGAATACTA AGGAAGTGTT AGCCGGTGTT AAACACCGTG AGCAGCTTTT CCGTGACGGA
CTTGCGACAA TCAATGCTAA ATATCAAGTA TTTTCTGAAG TGCGCGGCAA AGGCTTATTG
CTTGGCGCCG TGTTAAACGA CACTTACAAA GGCCGCAGCC GTGACTTTCT AATGGCCAGT
GTCGCTGAAG GGCTAATGAG TTTAGTGGCG GGTGCTGATG TGGTTCGATT CACTCCTTCG
TTAGTGATCC CAGAGGCTGA TATTGCCGAA GGTTTAGCTC GTTTTGAGCG CGCGGTTGCA
AGAGTAGTCG CTGGCTAA
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| Protein sequence | MSVEMKLNRA QFDEVMVPNY APSTVIPVRG EGSRVWDQEG TEFVDFAGGI AVNCLGHCHP
ALVGALKTQG EKLWHLSNVM TNEPALELAT KLVNATFAER VYFANSGAEA NEAALKLARR
YALENHGADK DQIIAFDKAF HGRTFFTVTV GGQAAYSDGF GPKPQSITHV PFNDIKALEA
VISDKTCAIM LEPLQGEGGI INGDPEFLKA VRALADKHDA LVIFDEVQTG VGRTGDLFAY
MATDIVPDIL TSAKALGGGF PIAAMLTTAK VAAHLKVGTH GSTYGGNPLA CAIGNAVLDV
VNTKEVLAGV KHREQLFRDG LATINAKYQV FSEVRGKGLL LGAVLNDTYK GRSRDFLMAS
VAEGLMSLVA GADVVRFTPS LVIPEADIAE GLARFERAVA RVVAG
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