| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3191 |
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| Symbol | astD |
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| ID | 4019717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3823031 |
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| End bp | 3824491 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637957241 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_564190 |
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| Protein GI | 91794539 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000779709 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAT ATATTAATGG TCAGTGGTTT GCTGGCCTTG GCCACCAGGT CAGCTCAATT
AACCCTGCGA CAGGGCAAAG CATTTGGAAT GGCGTAACGG CGACTGCCGA TCAAGTGAAT
CAAGCGGTAG ACGCTGCAAG AGCGGCTCAA TTTGATTGGT TTATGCTGGG GTTTGAAGCC
CGTTTATCCA TAGTCGAAGC CTATCGCAGT GAGCTTGAGG CCAATAAGGC ACAATTAGCC
GAAGTGATAG CCCAAGAAAC CGGTAAGCCT CAGTGGGAAA CCGCCACCGA AGTCGGCGCC
ATGATAGGCA AGATAGCCTT ATCTGCAGCA GCACACGATA AGCGCACTGG CACAGAAACT
AATGAGTTAG CGGCAGGCCG TGCTGTACTG CGTCACAAAC CTCATGGTGT GGTGGCAGTA
TTTGGCCCTT ATAACTTCCC AGGTCACTTA CCTAATGGGC ATATAGTGCC AGCCTTGCTT
GCGGGGAATA CCGTGGTATT TAAGCCGTCT GAGCTTACGC CAAAAGTGGC CGAAGAAATG
CTTAAGTTGT GGGACAAAGC GGGTCTGCCT AAGGGCGTGA TTAACTTAGT TCAAGGTGAA
GTTGAAACCG GCAAGGCATT AGCGTCACAC CCACAGATCG ATGGCTTATT CTTTACTGGT
AGCTCACGCA CAGGTCATAT TCTGCATCAG CAGTACGCCG GTCACCCAGG TAAAATTTTA
GCACTAGAGA TGGGCGGTAA TAACCCGCTT ATTGTTAAGG GTGTCAGTGA CACCAAAGCT
GCTGTGCATG ACATCATACA GTCGGCTTAT ATTTCATCGG GTCAACGCTG TACCTGCGCT
CGTCGCCTTT ACATTGAACA AGGCGCGGCG GGAGATGAGT TAATTGCCCA GTTAATTACT
GCGGTTAACA ATATTCAAGT GGGAGCGTGG AACAGCCAGC CACAACCCTT TATGGGCTCT
ATGATCTCTG AAACTGCGGC TCGCGGCATG GTTGCGGCGC AAGCGACTCT GCAAGCATTG
GGCGGCGTGT CCTTGGTTGA GCTTGCTCAA GTTGAAGCGG GTACAGGCCT TGTGTCTCCT
GGGCTTATCG ATGTGACTCA AATCGCTGAG CTTCCGGATG AAGAATACTT CGGACCACTA
CTTCAATTAG TGCGTTACAC AGATTTTGAT GAGGCTATTC GCCTTGCTAA TGCCACGCGT
TACGGTCTAT CAGCAGGCCT GTTGGCCGAC AACCGTGATG ATTACGATTA CTTCTTAGCC
CGTATTCGTG CCGGTATTGT TAACTGGAAT AAGCAGATCA CTGGCGCATC AGGCGCAGCG
CCTTTCGGCG GTGTTGGTGC ATCTGGTAAT CACAGAGCCA GCGCCTTCTA TGCCGCTGAT
TATTGTGCTT ATCCTGTTGC TTCAATGGAA GCTGACAGTG TCAGCATGCC AGCCAGCTTG
AGCCCAGGGT TAAGTATTTA A
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| Protein sequence | MTQYINGQWF AGLGHQVSSI NPATGQSIWN GVTATADQVN QAVDAARAAQ FDWFMLGFEA
RLSIVEAYRS ELEANKAQLA EVIAQETGKP QWETATEVGA MIGKIALSAA AHDKRTGTET
NELAAGRAVL RHKPHGVVAV FGPYNFPGHL PNGHIVPALL AGNTVVFKPS ELTPKVAEEM
LKLWDKAGLP KGVINLVQGE VETGKALASH PQIDGLFFTG SSRTGHILHQ QYAGHPGKIL
ALEMGGNNPL IVKGVSDTKA AVHDIIQSAY ISSGQRCTCA RRLYIEQGAA GDELIAQLIT
AVNNIQVGAW NSQPQPFMGS MISETAARGM VAAQATLQAL GGVSLVELAQ VEAGTGLVSP
GLIDVTQIAE LPDEEYFGPL LQLVRYTDFD EAIRLANATR YGLSAGLLAD NRDDYDYFLA
RIRAGIVNWN KQITGASGAA PFGGVGASGN HRASAFYAAD YCAYPVASME ADSVSMPASL
SPGLSI
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