| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3190 |
|---|
| Symbol | |
|---|
| ID | 4019716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3822316 |
|---|
| End bp | 3822951 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637957240 |
|---|
| Product | cAMP-regulatory protein |
|---|
| Protein accession | YP_564189 |
|---|
| Protein GI | 91794538 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000213612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA TAGGTAAGCC AAAGCCGGAT CCAACATTGG AGTGGTTTCT TTCACATTGT
CACATACACA AATACCCTGC CAAGAGCACG CTTATCCATG CGGGTGAAGA TTCAGATACC
TTGTACTACA TAGTTAAAGG TGGCGTTGCT GTCCTCATCA AAGATGAAGA AGGTAAGGAA
ATGATCTTAT CTTACCTTAA TCAAGGTGAC TTCATTGGTG AACTGGGGTT ATTTGAAGAA
CAGGCCGAAC GCACAGCGTC TGTACGCGCT AAGCAAGCCT GTGAAATAGC CGAGATTTCC
TACAAGAAAT TCAAGCAACT CATCCAAGCA AACCCAGATA TCTTAATGAA GTTAAGCTCA
CAGATGGCCC ACCGCTTACA CAGCACCAGC CAGAAAGTCG GTGACTTAGC CTTTTTAGAT
GTGGCAGGTC GAATAGCGCA AACCTTATTG CACCTTGCCA AGCTGCCCGA TGCCATGACC
CATCCCGATG GCATGCAAAT TAAAATTACT CGCCAAGAAA TTGGCCAAAT TGTCGGCTGC
TCTCGTGAGA CAGTAGGACG CATTTTAAAG ATGCTTGAAG AGCAAAACCT TATCCAAGCA
CATGGCAAAA CCATGGTGGT TTACGGCACT CGCTAA
|
|---|
| Protein sequence | MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGGVA VLIKDEEGKE
MILSYLNQGD FIGELGLFEE QAERTASVRA KQACEIAEIS YKKFKQLIQA NPDILMKLSS
QMAHRLHSTS QKVGDLAFLD VAGRIAQTLL HLAKLPDAMT HPDGMQIKIT RQEIGQIVGC
SRETVGRILK MLEEQNLIQA HGKTMVVYGT R
|
|---|
| |