| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3189 |
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| Symbol | |
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| ID | 4019715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3821205 |
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| End bp | 3822002 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957239 |
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| Product | Sel1-like protein |
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| Protein accession | YP_564188 |
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| Protein GI | 91794537 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000270269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGTATT CCCCTAAATT TGCCGTGTTA GCCTTAAGTC TTTATTTGGC AAGCGGTTGG
CAAACAGCGC AAGCCTTTAG CTTGCCATCA ACGCCCGCAT CACAAGCTGC GACTAAGTTG
ATGCAAATTC AGCTCAAATC CCAGCAGGGA GACCCAGAAG CTCAATTTTT ATTAGGCTTG
ATGAATCTAT CTGGCCGCCA TATGGAAAAA GATGTAAAAA CAGGGCTTCA CTGGGTTGAG
CAAGCGGCGT TGCAAGGTCA CCTTAAGGCG CAGCAAACCT TAGCCGACCT GTCTTTTGAA
GGTAAATTAT TTCCGCGGGA CTTAGCCCTT GCTGAGCGTT GGTATTTAGC CTTGAGTCAG
GCAGGCGATC CTTGGGCCCA TTTTCGCTTA GGCTTTATTT ACTCATCTGG CGGCAATGGG
GTTAACCGTG ATTGTGGCAA GGCGGTGACT CAGTTCTCTG CTGTGGGTGA TGCGGTGGCC
CTAGGCAATG TGGCATGGAT TTTAGCAACC TGCCCAGAGG CGCAGTTTAG GGACGGCTCA
CGGGCGGTGG AGTTGTCACT GAAATTGTTA CAAGATAACC AAGATGACCC AGCGAATCTT
GATAACCTTG CAGCAGCTTA TGCCGAAGTG GGTGACTTTT CTTTGGCAGT GCAAACACAA
GAGAAAGCCA TCGATGCGCT TAAGCAACAG CCAGAGCCTG CAAGTCATGA TGAGTTTCAG
CGCAGATTAC AGCACTATCA GAACAAGCAA GCTTATCGAG AAGTCATTTC CCTTGAGGAC
ACGCTTAAAC AACAATAA
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| Protein sequence | MTYSPKFAVL ALSLYLASGW QTAQAFSLPS TPASQAATKL MQIQLKSQQG DPEAQFLLGL
MNLSGRHMEK DVKTGLHWVE QAALQGHLKA QQTLADLSFE GKLFPRDLAL AERWYLALSQ
AGDPWAHFRL GFIYSSGGNG VNRDCGKAVT QFSAVGDAVA LGNVAWILAT CPEAQFRDGS
RAVELSLKLL QDNQDDPANL DNLAAAYAEV GDFSLAVQTQ EKAIDALKQQ PEPASHDEFQ
RRLQHYQNKQ AYREVISLED TLKQQ
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