| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3182 |
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| Symbol | |
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| ID | 4019708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3814077 |
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| End bp | 3815291 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637957232 |
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| Product | major facilitator transporter |
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| Protein accession | YP_564181 |
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| Protein GI | 91794530 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA ATAATCATTT ATTTAGCTCC AACCTAAAAA TGTGGCTGGC AATTTTTATT
CTTGCCATCT CAACATTTAC AATTGTTACT GCAGAATTAG CCCCGATAGG TTTACTTACC
CCTATGGCGG AAAGTTTGAA TCAGTCGGAA TCCATGATTG GATTAACCGT CACGCTATAT
GCTTGGATTG GTGCCATTAG CGCCTTATTG TCGAGTATTT TTTTGGGGAA TGTATCTAAA
AAACGTTTAT TACTGGGGCT AATTTTTATC TTGCTGGTCT CAAATGTATT GTCTGCTTTA
GCGAGCAGCT ACACCTTATT GTTAGCCGCG AGGGTGATAG GGGCATTATC ACACGGTGCT
TTTTGGGCCA TGATAGGTGC ACTGGCAATG TCGTTAGTGC CAGCAAGGCA GCTTGGTTTA
GCCACATCGA TTGTGTTTGC TGGGGTGTCT GCCGCCAGTG TATTTGGTGT GCCATTGGCT
AATTTTATTG GCAGTCAATG GACGTGGCAA AGTGCTTTCT GGCTAATCTC TTTGCTCAGT
GTTTTATCTT TAGTTGGGAT CCTCTGCTTA GTTCCTTCGG TAAAAGCGAA CAGTGAACTG
GGGGTGAGTG CACTCAAGCA AGTCATAACA GACCCCTTGT TACTAAAGAT TTATGCCGCA
ACCTTTATTG CTATTACGGC TCATTTTACT GCATTTACCT TTATAGAACC GTATCTGCAA
ACCAGTGACT CAGTATCCAA CACTATGATA GCCATGATGT TATTTACTTT TGGCTGTGCA
GGATTATTGG GGAACTTCAT TACAGGTGCT TTTATTGACA AGTACTTAAA GCGCTTAATA
GCAGTGGCCA TAGTCGCTAT TGCCTGTGTG TTAGTGACAT TAGGGATAGG GGCGCAAGCG
TTAACTCAAA CCGCTATTGT GCTGCTTATC TCTGTTTGGG GACTGGCGAC ATCGAGTGTG
TTTGTCGGCT TTCAAACTTG GGTGTTAAAA ACTGCGCAGC ACAGAGCCTT CCCAGCATCT
GCGGTATATG TGTCTATTTT TAATGCGGCG ATTGGTTCAG GGGCGCTATT GGGTGCTTGG
TTAGTTTCAC AATTTTCATT CTCAGTATTA ATGATTTGCT CAGGGGTAGC GATCGCATGC
TCGCTGGTGT TATTGGCGCT TGCGGCCACT AATGCTGTCC GAGTAGAAAC ACTGCCAGAG
GGGGAAAGTG TATGA
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| Protein sequence | MSENNHLFSS NLKMWLAIFI LAISTFTIVT AELAPIGLLT PMAESLNQSE SMIGLTVTLY
AWIGAISALL SSIFLGNVSK KRLLLGLIFI LLVSNVLSAL ASSYTLLLAA RVIGALSHGA
FWAMIGALAM SLVPARQLGL ATSIVFAGVS AASVFGVPLA NFIGSQWTWQ SAFWLISLLS
VLSLVGILCL VPSVKANSEL GVSALKQVIT DPLLLKIYAA TFIAITAHFT AFTFIEPYLQ
TSDSVSNTMI AMMLFTFGCA GLLGNFITGA FIDKYLKRLI AVAIVAIACV LVTLGIGAQA
LTQTAIVLLI SVWGLATSSV FVGFQTWVLK TAQHRAFPAS AVYVSIFNAA IGSGALLGAW
LVSQFSFSVL MICSGVAIAC SLVLLALAAT NAVRVETLPE GESV
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