Gene Sden_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3171 
Symbol 
ID4019697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3804230 
End bp3805093 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content51% 
IMG OID637957221 
Productglutamate--tRNA ligase 
Protein accessionYP_564170 
Protein GI91794519 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000837027 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGCTC TATATCGAGG CCGTTTCGCC CCTTCCCCTT CTGGCCCCTT GCATTTTGGC 
TCCTTAGTCG CCGCGCTCGG TAGCTACTTA CGTGCTAAAA GTCTCGGCGG TCAATGGTTA
GTGCGCATCG AAGATATCGA CCCCCCCAGA GAAATTGCCG GTGCTAGCAG CCAAATACTC
AAGACGCTCA CAGCATATGG TTTTGAGTGG GATGAGGACG TGCTTTATCA AAGCCAGCGC
ACAGCAGCTT ATCAAGCTCA AATAGACAGT TGGATAGCCC AAGGCCAAGC CTATTTTTGC
CAATGCAGTC GCAAACAAAT TCAGGCCATG GGCGGCACTT ATGATGGGCG CTGTAATCGA
TGCAGCCCAA AGTTAACCTC GGGTGCGGTG CGTATCGTTA ATCACAGTAA AATCGACCGC
TTCGATGATG TGCTAATGGG CACTATCATT CAAGATGCTC ACTTTTCTGG GGAAGATTTC
ATCATCAAAC GCAGCGATGG TCTCTATGCC TATCAGCTGG CTGTAGTGCT CGATGATGCG
TATCAAGGCA TCACTGAAGT GGTCAGAGGC AGCGACCTAT TGCAGCCCAC GGTGAGACAA
ATCAGCCTCT ATCGCTCATT AGGTTTAGCT GAGCCCGGCT GGCTGCATCT GCCATTGGCT
TGCACTGAAC CTGGCTTCAA GCTTTCCAAG CAAAACCATG CTCAGGGAAT TGACTTGCTA
AACCCAGGCC CTAGCATCAA TGCCGCCTTA GGCTTTTTAG GCCAAGCCGC GGTGGAGTTA
GCCAGCCCAA CCATCATGCT TGAACAAGCC GTAGCCCAGT TCAAACTTGA AGCTATCCCC
GTAAAGACAG AAATTCTGTT GTAA
 
Protein sequence
MTALYRGRFA PSPSGPLHFG SLVAALGSYL RAKSLGGQWL VRIEDIDPPR EIAGASSQIL 
KTLTAYGFEW DEDVLYQSQR TAAYQAQIDS WIAQGQAYFC QCSRKQIQAM GGTYDGRCNR
CSPKLTSGAV RIVNHSKIDR FDDVLMGTII QDAHFSGEDF IIKRSDGLYA YQLAVVLDDA
YQGITEVVRG SDLLQPTVRQ ISLYRSLGLA EPGWLHLPLA CTEPGFKLSK QNHAQGIDLL
NPGPSINAAL GFLGQAAVEL ASPTIMLEQA VAQFKLEAIP VKTEILL