Gene Sden_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3170 
Symbol 
ID4019696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3803692 
End bp3804135 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content46% 
IMG OID637957220 
ProductRNA polymerase-binding, DksA 
Protein accessionYP_564169 
Protein GI91794518 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000043315 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGAAG GCACTAAAAA ACTCGGCGTA CTCGCTATCG CAGGAGTCGA TCCTTACCAA 
GAGAAAGCCG GTGAGGAATA CATGAATCCA AAGCAGCGAA GTCACTTTAA AGTGATCCTC
GAGGCTTGGC GTAATCAATT ACGTGAAGAA GTTGACCGTA CCCTATCTCA CATGCAAGAC
GAAGCGGCAA ACTTCCCAGA TCCGGTCGAT CGTGCTGCTC AAGAGGAAGA ATTCAGCTTA
GAGTTACGCG CTCGTGATAG AGAACGTAAA CTCATTAAGA AAATTGAAAA AACCCTGCAA
AAAATTGAAG AAGACGATTT CGGCTTCTGC GATTCTTGTG GTGTTGAAAT TGGTATCCGT
CGCTTAGAAG CGCGTCCAAC AGCCGATCAG TGTATCGATT GTAAGACGTT AGCCGAGATC
AAAGAAAAGC AAATGGCGGG CTAA
 
Protein sequence
MPEGTKKLGV LAIAGVDPYQ EKAGEEYMNP KQRSHFKVIL EAWRNQLREE VDRTLSHMQD 
EAANFPDPVD RAAQEEEFSL ELRARDRERK LIKKIEKTLQ KIEEDDFGFC DSCGVEIGIR
RLEARPTADQ CIDCKTLAEI KEKQMAG