| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3129 |
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| Symbol | |
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| ID | 4019655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3759583 |
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| End bp | 3761289 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957180 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_564129 |
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| Protein GI | 91794478 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT ATCCCTTCAA CGCCACCCAA TTGGCCGCCA CAGCATTGTT CACCAGCTTA
GGCTTAGGCT CATTAACGGC CTGCGCCACA GAAGAAGTAG CCGACACCTT ACTCACTAAT
GGACAGATTT ATGGTTACCC ACAGGCCAGT AGCTTGGCCA TTAGTGACGG TAAAATTGTC
CATATTGGCA GTAATAGCAC CACTATGGAT TATGTCGGTA CTCAGACCCG AGTTATTGAC
CTTGAAGGCG CTTATGTGAT GCCAGGTTTT ATCGACAATC ATAACCATGT GTTCGAGGCG
GCTGGCGACA TAGGCAGCGA TTGCTTACTG GATAAAGTCA ATTCACTTGC TGGATATATC
ACTGAGCTAA AAGCCTGTGG CAATCAAGAC ACTGACAGCG AGTGGCTATT AGGTTACGGC
CATGAATTAG ACGTTTTATT AGATTATCAA TCACTTGGTA ATGGTGAACA AACACCGCTT
GAAATATTAG ATAGTCTCTA TCCGGACAGG CCCGTAGCCA TCATGGAGCA AACCTCTCAT
TCCATGTGGG TTAACTCCAT CGCCTTGGCA AGAGCCGGAA TAACGGCTAA AAGCACTGCG
CCTCAAGGGG GCAAGTACCT TAAAGAGCCA CACACTGGCA AGCTTTTAGG GGTATTACTC
GATACCGCAG GCGATGAACT CATGGAGCTT GCCTGGAACG CCCAGCCCAA TAGAGCCAAG
GCCAACTATC AGAGCCTAAT TAATGGCTTA GATGAAGCGG CCAAACACGG CATCACAGCC
ATAGGTGATG GCCGCCTCTA TTGGCAGCGC GGCTGGTATG AAACTTGGCA GCAAGTGGCA
AAAGATAATG CCCTCACCGC CAGAGTCAGC CTGCGTCCTT GGGTGTATCC AGGCCAAGAT
GCGCAAAAGC AGTTAGCCTT TTTCAAACGT ATTCAAACTG ATGATACCAA TGAGTTATTA
CTGGTCAATC AAGTGAAAAT CTATACTGAC GGCATCATCA ATAACGGCAC CGCCAGAGTA
TTAAGCCCCT ATGTTTACAG CCCATTGACT GATAGCCCTT TGGGAGTGGA TTACATTCCT
GCTGGCGAGC TAAGCACGTG GCTGGTGAAA CTGAATAATC TAGGCTTTGG CGCTCATATT
CACGCCATAG GTGATGCTGG GGTGCGTAAT GGTTTGGATG CCATTGAAGT GATGCGAAAG
CAAGGCGTCA CTCGCCCCTA CGGCATGACT CATCTTGAGA TGGTGGCAGA CACTGATATC
CCGCGTTTTG CAGCGCTTAA GGTCGATGCC GATTTTCAGG TAGGCAATCA TGACATAGCC
ACAGGAGATC ACGATTGGGC CATCCCTTAC CTAGGCAAGC AGCGCGCCAA AGCCTTGTTA
CCCGTACAGG CCATTTGGCA AACTGGCGCT AACACCACCC TAAGCAGTGA TTGGAATGTA
AATGATATCA ATCCATTAGT TGGGATATCC AGCGCCATCA AGATGCCAGG GCCGCTTGAT
ATCAATAGTG CCATCGACGC TTATACCATC AATGCCGCCA AAGCCTTAGG GTTAGAAAAA
GTCACCGGCT CTATTACTTT AGGTAAGTTT GCCGACCTTG CGATTCTCGA GGGCGACATC
ACCAAAATGA CTCCAGCGGA AATCGCAAAC ACTCAACTGT TAATGACATT ACTGGAAGGA
GAAGTGGTAT TTGAGGCGCA GGAGTAA
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| Protein sequence | MKKYPFNATQ LAATALFTSL GLGSLTACAT EEVADTLLTN GQIYGYPQAS SLAISDGKIV
HIGSNSTTMD YVGTQTRVID LEGAYVMPGF IDNHNHVFEA AGDIGSDCLL DKVNSLAGYI
TELKACGNQD TDSEWLLGYG HELDVLLDYQ SLGNGEQTPL EILDSLYPDR PVAIMEQTSH
SMWVNSIALA RAGITAKSTA PQGGKYLKEP HTGKLLGVLL DTAGDELMEL AWNAQPNRAK
ANYQSLINGL DEAAKHGITA IGDGRLYWQR GWYETWQQVA KDNALTARVS LRPWVYPGQD
AQKQLAFFKR IQTDDTNELL LVNQVKIYTD GIINNGTARV LSPYVYSPLT DSPLGVDYIP
AGELSTWLVK LNNLGFGAHI HAIGDAGVRN GLDAIEVMRK QGVTRPYGMT HLEMVADTDI
PRFAALKVDA DFQVGNHDIA TGDHDWAIPY LGKQRAKALL PVQAIWQTGA NTTLSSDWNV
NDINPLVGIS SAIKMPGPLD INSAIDAYTI NAAKALGLEK VTGSITLGKF ADLAILEGDI
TKMTPAEIAN TQLLMTLLEG EVVFEAQE
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