| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3114 |
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| Symbol | |
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| ID | 4019640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3742648 |
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| End bp | 3743751 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637957165 |
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| Product | Rieske (2Fe-2S) region |
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| Protein accession | YP_564114 |
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| Protein GI | 91794463 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGCAA CCCACTCTCT TGCGCCAGAA TGTTATTTCG ACGAACAGCT TTTTTTAAAA
GAAAAAACTG AAGTTTTTGA AAAAAATTGG ATTTTTGTAG GTTTTAGTGA ACAACTCGCC
AATAATCATG ACTTTATTAC TACTCAGATT GGCGATAAAT CTGTAGTTGT TCAAAATTTT
GGTGGTAGTA TCAGTGCTCT GCTTAATGTT TGTAGTCACA GAAAAGCGAC ACTACAGACA
CTATCGAATG GCAATAGACC CTTAGTCTGC CCATACCATT GCTGGAGTTA TAAAAAAGAT
GGTCAGTTGT CAGGTGTCCC TCTCAATCGC ACTGATTTCG GGTTGGATGA TGCGGGGAAA
AAAGCCTTAT CACTTAGGCA GTTTGCTTTA GAAACATGTG GGAGAATGCT GTTTGTTCGA
GTGGCCAAAG ACGGGCCGAC ACTGAGCGAA TTTCTTGGTC CATATTTTGA TATTTTAGAA
CAAATTTCAA CTTCTTTTAT TGAACCCGTT CAACAAGACA CCTTTGAGTG GAATACTAAT
TGGAAAATAG CATGCGAGAC CGTCTTAGAG GTTTACCATG TTACAGGTGT GCATCCTGAA
ACCTTCGCTA AATTTGCGAA AGCAGAGTGC GAAATTAACT TTTTTGATGG GCATAGCACA
GGTAATACTC CCCTACACGA TGAACCTAAA AAGTGGTGGA ATGGTGCAAG AAAACATTTG
AAGTTTGAGA AGCATGCTTA TTTTAAAGAA TACAATCATT ACTTTATTTA CCCTAACTTA
GCGATAGGCT TAACGGATGG TTCTTTGATG TCTTTGCAAA CTTATCAACC GGTAACTGCC
ATAAGTAGTA AGTTACATTT TCAGTTAAGA ATGATGAGCT CTGCTGAAAA TGCCAGAGTG
AGTGATGCAG TTAGGGCTGC GATAAAAGCA AATTTTACAG AATTTAATAA AATAATATTA
AATGAAGATA AGCTCGTAGC TGAATCTTGC CAAGTTAATA TGAGCAGTAA TAATATTCCT
GGTTTACTAG GAAAATGTGA AGATAGAATT CGTCATTTCC ATAGCGCTTG GCGTGAAGAT
ATGCAATATC AACAGGAAAG TTAA
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| Protein sequence | MIATHSLAPE CYFDEQLFLK EKTEVFEKNW IFVGFSEQLA NNHDFITTQI GDKSVVVQNF
GGSISALLNV CSHRKATLQT LSNGNRPLVC PYHCWSYKKD GQLSGVPLNR TDFGLDDAGK
KALSLRQFAL ETCGRMLFVR VAKDGPTLSE FLGPYFDILE QISTSFIEPV QQDTFEWNTN
WKIACETVLE VYHVTGVHPE TFAKFAKAEC EINFFDGHST GNTPLHDEPK KWWNGARKHL
KFEKHAYFKE YNHYFIYPNL AIGLTDGSLM SLQTYQPVTA ISSKLHFQLR MMSSAENARV
SDAVRAAIKA NFTEFNKIIL NEDKLVAESC QVNMSSNNIP GLLGKCEDRI RHFHSAWRED
MQYQQES
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