| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3110 |
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| Symbol | |
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| ID | 4019636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3739707 |
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| End bp | 3740480 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637957161 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_564110 |
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| Protein GI | 91794459 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTAG ATACAAAAAT AAATCCGATG GATTTAACTG GAAAGCAAGT GTTAGTTACG
GGAGCGTCAG CGGGTATTGG ACGCGCTTGT TGTACCTTGC TCAGCCAGCT CGGTGCAAAG
ATCATTTTAA CGGGGCGAAA TCAAGCCGGG CTTGAGGAGA CTTTGTCTAG TCTGAGTGGT
AATGGTCATA AAATCGCAGT ATTTGATATC AAGAATATTA ATGGCTTGGG GGATTGGGTT
AAATATCTCA GAAGTGAATA CGGCTATCTT GATAGTTTTG TACATTGTGC TGGGGTGCAA
ATAACCAAAC CTATTCGGTC ATTTGACCAA GGTTTTTTCG ATGACACTAT GCATGTCAAT
CTTGCGAGTG CAATGGCTAT CACCCAAGGC TTTAGATTAA AACGTGATCG ATCCAAACAA
GGTTCCATTG TGTTTGTATC TTCCATCGCT GGTCTCATTG GCCAAACAGG CAATACGGTT
TATGGTGCTA GTAAAGCAGG GCTCATGTCC TTAACTCGTG GTTTAGCAAT GGAATTACTC
AGAGACAATA TTAGAGTTAA TTGCGTTGCC CCCGCCTTGG TTGAGACAGA AATGGCTCAA
CGAGCACAAG ACAGCATGAC TGCAGCACAG TTTCAACACA TGCTTGATCA ACACCCTATG
GGTTTAGGTA AACCAGATGA CGTCGCAAAT GCTGTGGCTT TTTTGCTCAG CGATGCTGCA
AAATGGATAA ATGCCGTAAC CTTACCGGTG GAAGGTGGGT ATCTAGCTAA CTAA
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| Protein sequence | MMLDTKINPM DLTGKQVLVT GASAGIGRAC CTLLSQLGAK IILTGRNQAG LEETLSSLSG
NGHKIAVFDI KNINGLGDWV KYLRSEYGYL DSFVHCAGVQ ITKPIRSFDQ GFFDDTMHVN
LASAMAITQG FRLKRDRSKQ GSIVFVSSIA GLIGQTGNTV YGASKAGLMS LTRGLAMELL
RDNIRVNCVA PALVETEMAQ RAQDSMTAAQ FQHMLDQHPM GLGKPDDVAN AVAFLLSDAA
KWINAVTLPV EGGYLAN
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