| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3106 |
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| Symbol | |
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| ID | 4019632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3737022 |
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| End bp | 3737750 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637957157 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_564106 |
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| Protein GI | 91794455 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCATG TCATCGTCAG CGGTGGAAGT CGTGGATTAG GGCTCGGTAT CGTTAAATAC
TTGTTGAAAA ATGGGTATAT GGTATCGACT TGTAGCCGTA ATAAAACAGA TGAAATATCT
GAATTGGAAA AAGAGTTCTC TCAACTACGT TGGTTTAAAG CTGAAATCGG TAACGCAGAG
CAAACTTCAA TATTTGTTAA AGATGCGTGT AATTGGGCTG GAGATATCCC TTTATGGGGA
GTTGTTAACA ATGCTGGCAT AGCCAAAGAG GGAGTGTTAG CTACATTCCC AAATACTGAG
TCTGATGCCT TGATCCAAGT AAATTTAAAT GGTGCTCTAT ATTTGGCTCG TGATGTGCTT
AGGGTCTTCC TAAGGCAAAG GAGTGCGGGA CGAATTATCA ATATTAGTTC GATTATCGGC
AGCCGTGGTT ATGCTGGTTT AGCGGCATAT TCCGCCTCTA AAGCAGGACT CGATGGGCTA
ACTCGGGCGT TAGCCAGAGA AAATGGACGC AGAGGAATAA CGGTTAACTC TGTTGCGCCA
GGTTATCTAG AGACTGAAAT GTCTTCTACT TTATCGGAAC AAAAAAGAAA TCAAATTATT
CGCAGAACAC CCATCAATAG ATTGGGGTTT GTCGACGATA TCACCCCTGC AATTGGTTTT
TTACTTTCAG AAGATGCGAA TTTTATTACT GGTCAGACTT TGATCATTGA TGGCGGTATC
ACCAATTAG
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| Protein sequence | MRHVIVSGGS RGLGLGIVKY LLKNGYMVST CSRNKTDEIS ELEKEFSQLR WFKAEIGNAE
QTSIFVKDAC NWAGDIPLWG VVNNAGIAKE GVLATFPNTE SDALIQVNLN GALYLARDVL
RVFLRQRSAG RIINISSIIG SRGYAGLAAY SASKAGLDGL TRALARENGR RGITVNSVAP
GYLETEMSST LSEQKRNQII RRTPINRLGF VDDITPAIGF LLSEDANFIT GQTLIIDGGI
TN
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