Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3101 |
Symbol | |
ID | 4019627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3728633 |
End bp | 3729769 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637957152 |
Product | patatin |
Protein accession | YP_564101 |
Protein GI | 91794450 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.480347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAA GAGCCTTAGT GTTATCCGGT GGTGGTGCCA GGGGAGCCTA TCAAGTAGGG GTACTTAAAG CCATTGCCGA CATGCATGAT AAAAATAGCC ATAATCCTTT TTCTATTATC AGCGGTACTT CATCTGGGGC GATTAATGCC GTGGGGCTTG CTGCCTCGGC CAACAATTTT CGCCTAGCGG TTAAAAAGGT CGAATATTTT TGGCAGCAAA TCAGTGTCGA ACAAGTGTAC AAAGCCGGCG CACTGGATCT GGTTAAAAGT GGCGGCACCT TGTTGCTCTC GTTGTTAAAT CAAGGCATAG GCATGAATCG GCCTTTAGCC TTTCTTAATA ATGCACCATT GCGGGAATTA CTTGGTAGCA CCATACAGTT TAAAAATATT CAAAAACGCA TAGATGCGGG CTACTTAGAT GCGGTAGCAA TCAATGCTAC CGGATATACC TCGGGTGAGT CGGTGAGTTT TTTCCAAGGT AAGCCTGGCT TCAAGGGCTG GCGCAAAGGC CGTCGAGTCG GGGTGCCGAC ACGGCTTGCT GTACAACACT TGATGGCATC CTCGGCAATT CCGACCATTT TCCCCGCCGA ACAAGTGAGC CGTGAATATT TTGGTGACGG CGCCTTAAGA CAGCTTGCGC CCTTAAGTCC GGCGCTTAAA TTTGGTGCCG ACAAGATTTT GGTCATAGGG GTTAGCGGTA ACCCTCGAAT TATCCCCAAG CGTGAAACCA CCACTCATTC ACCATCACTT GCGCAGATGG TTGGCCATCT GTTTAACAGC GCCTTTGTCG ATAGCTTAGA GCATGACGTG GATATTATGT TGCGGATGAA CGATCTTATT CGTATTAATC AAAATACCGC GGCCCACACG GAACAAGGTG AGGTCAGGGC GGTCAATTTA CTGGCTTTAA ATCCCAAGGT GGAGTTCGAC AAGGTCGCGG CTCGCCATGT GCATACCCTG CCAATGGCCA TGCGTTACAT GATGAAAACC ACAGGTGCGA CAGGTAAGGG GGGCGGTGCG AGTTTTGCCA GTTACCTGTT ATTCGAGCCG GGATTCTGTA AAGAGTTAAT TAGCCAAGGC TATCAAGATG CCATGGAAGA AGAAGTGGCC ATACGTGAGT TTTTTGCTAA AGATTAA
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Protein sequence | MTKRALVLSG GGARGAYQVG VLKAIADMHD KNSHNPFSII SGTSSGAINA VGLAASANNF RLAVKKVEYF WQQISVEQVY KAGALDLVKS GGTLLLSLLN QGIGMNRPLA FLNNAPLREL LGSTIQFKNI QKRIDAGYLD AVAINATGYT SGESVSFFQG KPGFKGWRKG RRVGVPTRLA VQHLMASSAI PTIFPAEQVS REYFGDGALR QLAPLSPALK FGADKILVIG VSGNPRIIPK RETTTHSPSL AQMVGHLFNS AFVDSLEHDV DIMLRMNDLI RINQNTAAHT EQGEVRAVNL LALNPKVEFD KVAARHVHTL PMAMRYMMKT TGATGKGGGA SFASYLLFEP GFCKELISQG YQDAMEEEVA IREFFAKD
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