Gene Sden_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3101 
Symbol 
ID4019627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3728633 
End bp3729769 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content49% 
IMG OID637957152 
Productpatatin 
Protein accessionYP_564101 
Protein GI91794450 
COG category[R] General function prediction only 
COG ID[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.480347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAA GAGCCTTAGT GTTATCCGGT GGTGGTGCCA GGGGAGCCTA TCAAGTAGGG 
GTACTTAAAG CCATTGCCGA CATGCATGAT AAAAATAGCC ATAATCCTTT TTCTATTATC
AGCGGTACTT CATCTGGGGC GATTAATGCC GTGGGGCTTG CTGCCTCGGC CAACAATTTT
CGCCTAGCGG TTAAAAAGGT CGAATATTTT TGGCAGCAAA TCAGTGTCGA ACAAGTGTAC
AAAGCCGGCG CACTGGATCT GGTTAAAAGT GGCGGCACCT TGTTGCTCTC GTTGTTAAAT
CAAGGCATAG GCATGAATCG GCCTTTAGCC TTTCTTAATA ATGCACCATT GCGGGAATTA
CTTGGTAGCA CCATACAGTT TAAAAATATT CAAAAACGCA TAGATGCGGG CTACTTAGAT
GCGGTAGCAA TCAATGCTAC CGGATATACC TCGGGTGAGT CGGTGAGTTT TTTCCAAGGT
AAGCCTGGCT TCAAGGGCTG GCGCAAAGGC CGTCGAGTCG GGGTGCCGAC ACGGCTTGCT
GTACAACACT TGATGGCATC CTCGGCAATT CCGACCATTT TCCCCGCCGA ACAAGTGAGC
CGTGAATATT TTGGTGACGG CGCCTTAAGA CAGCTTGCGC CCTTAAGTCC GGCGCTTAAA
TTTGGTGCCG ACAAGATTTT GGTCATAGGG GTTAGCGGTA ACCCTCGAAT TATCCCCAAG
CGTGAAACCA CCACTCATTC ACCATCACTT GCGCAGATGG TTGGCCATCT GTTTAACAGC
GCCTTTGTCG ATAGCTTAGA GCATGACGTG GATATTATGT TGCGGATGAA CGATCTTATT
CGTATTAATC AAAATACCGC GGCCCACACG GAACAAGGTG AGGTCAGGGC GGTCAATTTA
CTGGCTTTAA ATCCCAAGGT GGAGTTCGAC AAGGTCGCGG CTCGCCATGT GCATACCCTG
CCAATGGCCA TGCGTTACAT GATGAAAACC ACAGGTGCGA CAGGTAAGGG GGGCGGTGCG
AGTTTTGCCA GTTACCTGTT ATTCGAGCCG GGATTCTGTA AAGAGTTAAT TAGCCAAGGC
TATCAAGATG CCATGGAAGA AGAAGTGGCC ATACGTGAGT TTTTTGCTAA AGATTAA
 
Protein sequence
MTKRALVLSG GGARGAYQVG VLKAIADMHD KNSHNPFSII SGTSSGAINA VGLAASANNF 
RLAVKKVEYF WQQISVEQVY KAGALDLVKS GGTLLLSLLN QGIGMNRPLA FLNNAPLREL
LGSTIQFKNI QKRIDAGYLD AVAINATGYT SGESVSFFQG KPGFKGWRKG RRVGVPTRLA
VQHLMASSAI PTIFPAEQVS REYFGDGALR QLAPLSPALK FGADKILVIG VSGNPRIIPK
RETTTHSPSL AQMVGHLFNS AFVDSLEHDV DIMLRMNDLI RINQNTAAHT EQGEVRAVNL
LALNPKVEFD KVAARHVHTL PMAMRYMMKT TGATGKGGGA SFASYLLFEP GFCKELISQG
YQDAMEEEVA IREFFAKD