Gene Sden_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3092 
Symbol 
ID4019618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3713796 
End bp3714272 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content47% 
IMG OID637957143 
Productphenylacetic acid degradation-related protein 
Protein accessionYP_564092 
Protein GI91794441 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAC TGAGACCAAA ATTTTGTAAG GATAGTTTGA TGAGCATTTG GTTTAGAGAA 
GTCACATTAG CAGATTGCCA AAAATTAGAT TTAGGTATGC ATGGCAAAGG CACCTTGATG
CAGACCTTAG GCATACAAAT CACAGAAATT GGTGAAGATT TCATGGTGGC GACTATGCCA
GCAACGCCCT CCATCCATAA CCCACTAGGG ATAGTCCATG GTGGTGCCAA TGTCGCACTG
GCTGAAACCG TTGCCAGTTA CGCGGCCAAT TTCGCCGTGG ATTTTGAGCG TTTTTATTGT
GTTGGCCAAG AAATTAATGC CAATCACTTA AAAGCGTCTC GTAACGGGGT GTTAACCGCC
ACCACTAAGC CGGTGCATTT AGGTAAGCGC AGCTCGGTAT GGGAAGTGCT TATCCACAAT
AGCGCCGGTG AACTGTGCTG CATTTCGCGC ATGACAGCCG CTGTGGTTGA GCGCTAA
 
Protein sequence
MSRLRPKFCK DSLMSIWFRE VTLADCQKLD LGMHGKGTLM QTLGIQITEI GEDFMVATMP 
ATPSIHNPLG IVHGGANVAL AETVASYAAN FAVDFERFYC VGQEINANHL KASRNGVLTA
TTKPVHLGKR SSVWEVLIHN SAGELCCISR MTAAVVER