| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3065 |
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| Symbol | |
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| ID | 4019591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3681133 |
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| End bp | 3682233 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637957117 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_564066 |
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| Protein GI | 91794415 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.5229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGA AATTATTTAA ATGGCACTCC TACACCGCCC TTATCACCCT GCTGCCGTTA
TTGATAATCT CAATCACTGG CAGCATTTTA GTATTTAAAG TTGAGTTAGA TAGCCTGCTA
AGACCTGCGC ACATGTTAGT TAACGCTGCG CCAGATGCTG CGCGGGTTAG TCTAGACAGC
ATGATGAGCA AAGTGCTTAC ACAAAACATC GAATTTGAAC TGGGAGGATG GGAGCTATTT
GATAATCACA GCCGCTCAGA TGCGGCTTAC CTCATAAAAC GTGGTACAGA AGAATGGTAT
AAAGTTTATA TTAATCAATA TACTGGTGAG CTGCTATCCC AGCCGTACAT CATGGGGCAT
TATCTCACCG ACTGGCTGCT TGAGCTGCAT TACACCTTTT TGCTTCACCT GGTTGGTACT
AGCTTCGGCT TTGTGATGGC CTTGATTATG CTTTTTTTGG GGATAAGCGG CATCATCTTA
TATAAAAAGT TTTGGTCTAA ACTGCTCACT TTTAGAATAA AAGCCGCAAC TCGTATGCTA
CTCAGTGATA TTCATAAATT TACCGGTATC ACCAGCTCAC CTATGTTGAT TGTCATTGCT
GCAACTGGAG CCTACTGGAA CATCGCCAGC ATCTTACATG AGGTCGATGA GCACCCAAGA
GGGGGGCATG TATTCATTGA GCAGCCATTA CATGCTGCGC AGATTTCTTT TGAATCACTT
AAGATCCAAG CTGAAACTCA CATCCCAAGT TTTCAGGCAG GTTACCTTGC CATGCCACAC
AAAAAAGATT TAGATATCGT CTTCTATGGT GACGTTGATA GTCACAACCC ACTCCATAGC
GAATACGCCA GCACAGTCGG TTTTGATAAA CTCACAGGCG AACTCATTTA TGAACAAGAT
ATTCGCCAGG CTAGCATACT CATGGTGTTT TTAGACAGTT TTAGAAAACT TCACTTTGGC
TATTTTGGCG GCCTTCTCAG CCGTGTTCTT TGGTGCATGG TTGGACTCAT GCCTTTGATA
TTAGGCCTGA CTGGGATTTA TATGTATGCC CTGCGGCAAA AACTAGCCAT ATTCCCATTA
AGAACCCCAA AGCCTGCTTA A
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| Protein sequence | MRKKLFKWHS YTALITLLPL LIISITGSIL VFKVELDSLL RPAHMLVNAA PDAARVSLDS
MMSKVLTQNI EFELGGWELF DNHSRSDAAY LIKRGTEEWY KVYINQYTGE LLSQPYIMGH
YLTDWLLELH YTFLLHLVGT SFGFVMALIM LFLGISGIIL YKKFWSKLLT FRIKAATRML
LSDIHKFTGI TSSPMLIVIA ATGAYWNIAS ILHEVDEHPR GGHVFIEQPL HAAQISFESL
KIQAETHIPS FQAGYLAMPH KKDLDIVFYG DVDSHNPLHS EYASTVGFDK LTGELIYEQD
IRQASILMVF LDSFRKLHFG YFGGLLSRVL WCMVGLMPLI LGLTGIYMYA LRQKLAIFPL
RTPKPA
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