Gene Sden_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3062 
Symbol 
ID4019588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3675942 
End bp3676934 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content42% 
IMG OID637957114 
Producthypothetical protein 
Protein accessionYP_564063 
Protein GI91794412 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGAT TAGCACTGAT ATTAACGGGA TTTATCTTAG CGACAGGGGT TATCTACAAA 
AGTGTATTTG CAACGGCGAA TTTCCCCATA ATACCCCACA CCTATCGGAT AGCAGTGTCT
AGTACTCCCT TGTCTGCGCC TTTTTTTGTC GCCGAGCAAC AAGGTTTATT TAAAAAGTTT
GGCTTAAATA TTGAGTTGCA GCTGTTAAAT GGCGGGGTTA AGTGTTTTGA GCAGATGATA
GCGGGTGATG CGGAATTTGC TACAGCCTCA GAAACCGTGG TGATGTTTAA TAGCTTTTTC
AGGGATGATT TCACTGTGCT GACAAGTTTT GTCGAGTCTG ATAATGATGT AAAGCTCTTG
AGTTTGAATC CTGATAAATA TCCTAATATC GCTAATCTCA AAGGTGCACG CGTCGGTATG
ATTAAAAGCA GTGCCAGTGA GTTTTTTATT GATAACACGC TTATCCTGCA TTCAAAAAGT
TTAGATTTTA TCGATAGAGT CTACTTGAGT GCCAGTGAGC TAGTCCCAGC TTTGCTGGCC
GGGAAGGTTG ATATCATTTC CGCTTGGGAG CCGCTTGGGT ATCAAGTGTC TCAGCTTGCT
ACTGGGCCAA TTCAAGTACT GAGTACTAAA GGTTTGTATA GTCTCTCATT CAATTTAATC
ACAAAAAAAA ATCTAGCTAA AAAGAATGTC GAGGCAAATG CCAGGATATT ACAAGCACTA
TCAGAGGCTA TCGACCTTAT TAATGCCGCA CCAGAGCAGT ATCAACAAGA TGTGAGTCAA
TTACTTCAGG TATCACAATC TGAGCTGAGT TATTCGTGGC GAGATTATGT GTTTCGCCTT
TCTCTTGGGA ATTCACTCGT ATCTAACTTG CAAACTCAAG CACGGTGGGC ATTACAGAAT
CGTTTAGTGC CAGGGGATGT GACTGTGGAT TTTCGTAATG TTATACATAC TCAAGCCTTC
GAGGATATGA GTCGCCAGCG GAGCCTGTGG TAA
 
Protein sequence
MIRLALILTG FILATGVIYK SVFATANFPI IPHTYRIAVS STPLSAPFFV AEQQGLFKKF 
GLNIELQLLN GGVKCFEQMI AGDAEFATAS ETVVMFNSFF RDDFTVLTSF VESDNDVKLL
SLNPDKYPNI ANLKGARVGM IKSSASEFFI DNTLILHSKS LDFIDRVYLS ASELVPALLA
GKVDIISAWE PLGYQVSQLA TGPIQVLSTK GLYSLSFNLI TKKNLAKKNV EANARILQAL
SEAIDLINAA PEQYQQDVSQ LLQVSQSELS YSWRDYVFRL SLGNSLVSNL QTQARWALQN
RLVPGDVTVD FRNVIHTQAF EDMSRQRSLW