| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3059 |
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| Symbol | |
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| ID | 4019585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3672117 |
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| End bp | 3673598 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957111 |
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| Product | carboxylyase-like protein |
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| Protein accession | YP_564060 |
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| Protein GI | 91794409 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA AGGATTTACG CAGCTTTATT GATCACTTAG AAGCCAATGG CGAACTTAAA
CGCATTAGTT ATCCCGTTGA TCCTTATTTA GAAATGACTG AAATTGCCGA TCGCGTACTG
CGCTCAGGTG GTCCTGCGTT ATTGTTTGAA AACCCAAAAG ATAACACTAT GCCTGTATTG
GTTAACCTCT TCGGTACCCC TAAACGGGTT GCCATGGCGT TGGGTAAGGA AGACCCTTTA
GCCCTGCGGG AAGTAGGGGA ATTACTGGCT TTTTTAAAAG AGCCCGAGCC ACCAACGGGT
TTCAAAGATG CCCTAGCCAA ACTGCCTAAG TTTAAGCAAG CCTTAAACAT GCCGCCTAAA
TCTGTGAGTC ATGCCCCTTG TCAGCAAGTG GTGATCACAG GTGATGAGGT TGATTTAACC
GCATTACCTA TTCAGCATTG CTGGCCCGGC GACGTAGCTC CACTAGTGAC TTGGGGACTG
ACCATTACCA AAGGCCCGAG ACAAAAAAGG CAAAACTTAG GTATCTACCG CCAACAGTTA
TTGGGCAAAA ATAAACTGAT TATGCGCTGG CTCGATCATC GTGGTGGCGC TTTAGACTTT
AAAGACTTTA AGGAGCTTCA TCCTGGAGAG CGCTACCCTG TGGTAGTAGC TCTTGGTAGC
GATCCTGTGA CAATTCTAGC TGCGGTGACC CCGGTACCTG ATTCTATGAG TGAATACGCC
TTTGCCGGCC TGCTCAGGGG CGAGCGCACT GAGGTGTGTA AAGCCATCAG TTGCGATTTA
GAAGTGCCTG CGACCAGTGA GATCATTTTA GAAGGCTATA TCGATCCTAA TGAAATGGCT
GAAGAAGGGC CATACGGGGA TCACACGGGT TACTACAATG AGACCGACAG TTTCCCTGTC
TTTACTGTAA CTCATATCAC TAAGCGCAAA GATGCCATTT ACCACAGCAC GTACACAGGT
CGTCCGCCGG ATGAGCCTGC CATGCTTGGG GTTGCGCTTA ATGAAGTGTT TGTGCCGATT
TTACGTAAGC AATACCCTGA AATTATTGAT TTTTACTTGC CACCGGAAGG TTGCTCATAC
CGTATGGCGG TGATCTCCAT TCGTAAACAA TACCCAGGGC ATGCCAAGCG AGTGATGATG
GGGGCTTGGT CTTTTTTACG CCAATTTATG TATACCAAGT TCATCATAGT GGTGGATGAG
GACGTAAATT GTCGCGACTG GCAAGATGTT ATTTGGGCGA TCACGACTCG CATGGATCCC
ACCCGTGACA CTACCTTGAT CGATCACACT CCTATAGATT ACTTGGACTT TGCCTCTCCT
GTGGCGGGGC TTGGCTCGAA AATGGGCCTA GATGCCACTA ATAAATGGCC AGGTGAAACC
CAAAGAGAAT GGGGCACCCC CATAGTCATG GACCCCAATG TAAAGCAAAA AGTAGATGAA
ATTTGGCAAG ACTTAGGCAT AGACAGTCAT CCGACCCTCT AA
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| Protein sequence | MSFKDLRSFI DHLEANGELK RISYPVDPYL EMTEIADRVL RSGGPALLFE NPKDNTMPVL
VNLFGTPKRV AMALGKEDPL ALREVGELLA FLKEPEPPTG FKDALAKLPK FKQALNMPPK
SVSHAPCQQV VITGDEVDLT ALPIQHCWPG DVAPLVTWGL TITKGPRQKR QNLGIYRQQL
LGKNKLIMRW LDHRGGALDF KDFKELHPGE RYPVVVALGS DPVTILAAVT PVPDSMSEYA
FAGLLRGERT EVCKAISCDL EVPATSEIIL EGYIDPNEMA EEGPYGDHTG YYNETDSFPV
FTVTHITKRK DAIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIID FYLPPEGCSY
RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIIVVDE DVNCRDWQDV IWAITTRMDP
TRDTTLIDHT PIDYLDFASP VAGLGSKMGL DATNKWPGET QREWGTPIVM DPNVKQKVDE
IWQDLGIDSH PTL
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