Gene Sden_3058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3058 
Symbolfre 
ID4019584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3671343 
End bp3672041 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content45% 
IMG OID637957110 
ProductFMN reductase 
Protein accessionYP_564059 
Protein GI91794408 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA TTCGTTGTCA GGTAGAAAAA ATTACGCCAT TTAATGATGC TGTTTATCAG 
GTATTGCTTA GACCTGAGGC TGGCTTTGAA TTTAAAGCAG GGCAATATCT TAGTGTTGTT
ATGGCAGAAA ATGACAAACG TCCTTTCTCT ATTGCCTCAG CACCAGGACT CGATACCCTT
GAATTGCATA TCGGTGCCGC GGTCAGCGAA AGCTACCCTA TGCAAGTGGT GGAGCGGTTA
AAGAATTCGA CTCATATTGA TATCGAAGCG CCAGCGGGTG ACGCTTTTTT ACGTCAAGAA
AGTCAAAGAC CTCGACTTAT GATCGCGGGT GGCACAGGTT TTTCTTACAT CAAAAGCATT
ATCGAGTCAC AAATTTCCCT TGGTCAGACA GTTCACACTC AGTTTTATTG GGGTTGCCGA
AACCAAGATG CCATGTATTA CCAAGGCATT GCCCGTGAGT GGCACAAGGC TCACACATGG
CTTGAATTTA TTCCTGTCGT TGAAGATGCA CCACAAGGTT GGCAAGGCAA ACAGGGCAAC
CTGTTGAAAC AAATCGAGCA AGATTTTGTT AGCCTAATCG GCTATGACAT CTATATCGCC
GGCCGTTTCG ATATGGTCGG CGCTGCAAGG CAGGTGTTTC GTGAAATGGG CGTCGAAGAA
GCGCATTTAT ACGGCGATGC TTTTGCTTTT ATTAAATAG
 
Protein sequence
MKTIRCQVEK ITPFNDAVYQ VLLRPEAGFE FKAGQYLSVV MAENDKRPFS IASAPGLDTL 
ELHIGAAVSE SYPMQVVERL KNSTHIDIEA PAGDAFLRQE SQRPRLMIAG GTGFSYIKSI
IESQISLGQT VHTQFYWGCR NQDAMYYQGI AREWHKAHTW LEFIPVVEDA PQGWQGKQGN
LLKQIEQDFV SLIGYDIYIA GRFDMVGAAR QVFREMGVEE AHLYGDAFAF IK