| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3056 |
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| Symbol | |
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| ID | 4019582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3669828 |
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| End bp | 3670643 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957108 |
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| Product | hydratase/decarboxylase family protein |
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| Protein accession | YP_564057 |
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| Protein GI | 91794406 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCAA GTAGTGAGTT AGCGTTACGA CGCATAGCCG GGATCCCAGG CCCTAGGCTT
GCTGCAGAAT CTAGGCCTGA TAACTTTATC GATGCCTTTG CCCTGCAACA GCAAATTTCC
CAGGAGGTGT GCCAGCAAGC GAATACACAA GTGATTGGCT GGAAGTGCTT GCTCCCTGTG
ACGGATAGCC TTACAGGCGA CACAAAATAC GTAGTAGCGC CCATTTTTGC TTCCACAGTC
ACCACTGAGT GCAAAAGTAG CGCCACATTA AGCACCCTAT GCAGTGTGTA TCCTTCATCT
AAAGGACTGG CGCGAGTCGA GCCGGAACTC GCCTTTGAAT TTAACAAGGC GCTCGCTCCC
CAGGAGGGTG AATATACCCA TGCTCAGATA GATGATGCCA TTGGTAGTGT ACGCTTGGCC
CTTGAGCTTA TTCAGAGTCG TTATAGTCAG CCCAGTGAGG TCAGTTATTT TGAGGCCTTG
GCTGATGGTC TTGTGAATCA AGGCCTGTAT CTTGGTCCTA AAATCGATTA CCCCAAGGGG
GATGATTTAA GCTCAGTGGC GGCATTTGAG CTTCAAGTAA GCCAAGGAGA AAGGTCCCTG
CCTCGTCGGT ACCAAGCTAA ACACCCCAAT CACACCCCCA AAGCTGGGCT CTATTGGTTG
GTGAACTTCT TATCTCAGCA AGGGATAGGC GTACAGGCGG GCCAGCAAGT GATAACCGGT
TCCTATGCTG GCGTGCTGGA TTTGCCAATG GATCAAGATA TTCAGTTTAG CTATGGCGAC
TTAGGTCAAT TTAAGCTGAT GTTTCGAGTT AAATAA
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| Protein sequence | MTPSSELALR RIAGIPGPRL AAESRPDNFI DAFALQQQIS QEVCQQANTQ VIGWKCLLPV
TDSLTGDTKY VVAPIFASTV TTECKSSATL STLCSVYPSS KGLARVEPEL AFEFNKALAP
QEGEYTHAQI DDAIGSVRLA LELIQSRYSQ PSEVSYFEAL ADGLVNQGLY LGPKIDYPKG
DDLSSVAAFE LQVSQGERSL PRRYQAKHPN HTPKAGLYWL VNFLSQQGIG VQAGQQVITG
SYAGVLDLPM DQDIQFSYGD LGQFKLMFRV K
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