Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3049 |
Symbol | |
ID | 4019575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3660056 |
End bp | 3660517 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637957101 |
Product | DNA-binding transcriptional regulator AsnC |
Protein accession | YP_564050 |
Protein GI | 91794399 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.756059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATACCG CATTTCAGCG CGACCAACTC GACAATCATA TTCTTGAAGC CCTAATGCAA GACGCCCGCA CCCCCTTTGC CGAACTGGCA AAACGCTTTA ATGTTAGCGC TGGCACCATC CACGTACGAG TGGAAAAAAT GAAACAAGCT GGCATCATTA CTGGGGCACA AATTACCGTC AATCCCAAAG CCCTAGGTTA TGATGTCTGT TGTTTTATCG GGATTAATCT TAAAAGCGCT GGAGATTATC CAGCCGCCAT AGCCAAGCTT AATGCCCTAG AAGAAGTTGT CGAAGCCTAT TACACCACAG GCAACTACAG CATCTTTGTT AAAGTCATGT GTCAATCCAT AGAAGCGTTA CAGCATGTGT TGATAAATCG CATTCAATCT ATCGATGAAA TCCAATCCAC AGAAACCCTC ATCAGCCTAC AAAACCCCAT AGTCAGAAGC GTAAAACCAT AG
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Protein sequence | MDTAFQRDQL DNHILEALMQ DARTPFAELA KRFNVSAGTI HVRVEKMKQA GIITGAQITV NPKALGYDVC CFIGINLKSA GDYPAAIAKL NALEEVVEAY YTTGNYSIFV KVMCQSIEAL QHVLINRIQS IDEIQSTETL ISLQNPIVRS VKP
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