Gene Sden_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3049 
Symbol 
ID4019575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3660056 
End bp3660517 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content45% 
IMG OID637957101 
ProductDNA-binding transcriptional regulator AsnC 
Protein accessionYP_564050 
Protein GI91794399 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.756059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATACCG CATTTCAGCG CGACCAACTC GACAATCATA TTCTTGAAGC CCTAATGCAA 
GACGCCCGCA CCCCCTTTGC CGAACTGGCA AAACGCTTTA ATGTTAGCGC TGGCACCATC
CACGTACGAG TGGAAAAAAT GAAACAAGCT GGCATCATTA CTGGGGCACA AATTACCGTC
AATCCCAAAG CCCTAGGTTA TGATGTCTGT TGTTTTATCG GGATTAATCT TAAAAGCGCT
GGAGATTATC CAGCCGCCAT AGCCAAGCTT AATGCCCTAG AAGAAGTTGT CGAAGCCTAT
TACACCACAG GCAACTACAG CATCTTTGTT AAAGTCATGT GTCAATCCAT AGAAGCGTTA
CAGCATGTGT TGATAAATCG CATTCAATCT ATCGATGAAA TCCAATCCAC AGAAACCCTC
ATCAGCCTAC AAAACCCCAT AGTCAGAAGC GTAAAACCAT AG
 
Protein sequence
MDTAFQRDQL DNHILEALMQ DARTPFAELA KRFNVSAGTI HVRVEKMKQA GIITGAQITV 
NPKALGYDVC CFIGINLKSA GDYPAAIAKL NALEEVVEAY YTTGNYSIFV KVMCQSIEAL
QHVLINRIQS IDEIQSTETL ISLQNPIVRS VKP