| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3042 |
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| Symbol | |
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| ID | 4019568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3652186 |
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| End bp | 3652929 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957094 |
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| Product | putative spermidine synthase |
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| Protein accession | YP_564043 |
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| Protein GI | 91794392 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.784993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATA TCAAGGTATT ACACCAATCC AACGATCAGC TCGGGACCAT TTCAGTGATC
GATGACGATC ATTTTCGGAT TCTCTCCTTT GGCGATAACG ACGAACAAAG CAAGATGCTG
CGGCTTGCCC CCTATATTCC CCAGCACACT TATGTGCAAG CCATGCTGTT GTCCTTACTC
TTTATTAAAC CTAAGAGTGC CATTATTTTA GGGCTAGGAG GTGGCGCCCT AGTGCATGCA
CTGCGTCATT GTGATGCTGC CATTAAGCTT ACTGCCGTTG AATTAAGAGC GGATGTGATT
GAGATAGCTA AACGCTATTT TCAGCTGCCT ATAGGCAAAA AATTACAACT TATCAATCAA
GATGCTAGCG TGTTTTTACA GGAGAGCCAG CATAAACGAG TCGATGTTAT CTACGCCGAT
ATGTATATAG AGCAAGGAGT GGACAAAAAT CAGCTAACCC AAAGCTTTAT TACGTCTTGT
CAGCAGCAAC TCAAAGTCGA TGGCTTGCTG GTGCTCAATT GCTGGAAAGA GCACAGCCGG
GACAGGCAAT TACTCGAGCA TTTAAAAGCG CAGTTTACTG AGGTATATGC CTGCTTAACC
AATGGCGGCA ATTGGGTGGT TTTTGCCACC AATACCTTAG GTCGCTTCGA GGCGGCAAAC
AATAAAACGG CGATACAAGC CTTATCGCAG CAGCTGGAAG TTAATTTGAG CAGAACACTG
ACCCGATTCG GTCCTTGGGA TTAA
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| Protein sequence | MSDIKVLHQS NDQLGTISVI DDDHFRILSF GDNDEQSKML RLAPYIPQHT YVQAMLLSLL
FIKPKSAIIL GLGGGALVHA LRHCDAAIKL TAVELRADVI EIAKRYFQLP IGKKLQLINQ
DASVFLQESQ HKRVDVIYAD MYIEQGVDKN QLTQSFITSC QQQLKVDGLL VLNCWKEHSR
DRQLLEHLKA QFTEVYACLT NGGNWVVFAT NTLGRFEAAN NKTAIQALSQ QLEVNLSRTL
TRFGPWD
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