Gene Sden_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3040 
Symbol 
ID4019566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp3650287 
End bp3651045 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content46% 
IMG OID637957092 
Producthypothetical protein 
Protein accessionYP_564041 
Protein GI91794390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.138337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCA GTCTGATTGA AATTACCGCT CAAGAAATAA AACAACTTGC CGACGTCGAG 
CCTAAGCAGG CCAGCAAGCG GTTTGAGATC ATAGCCAACA CCATGACGGA TGCCCAATTG 
GTGGAAGTGA TTGAGCACAT GGATATCGTC ACCCTGACTC AAATTAATAG TCATCATGAT 
ATTTCTTGCC CGTCAATCAT GTCGGAACTC ATGAGCCCTG AGCAAATTCG CGACATCGTT 
TGCCAGCAGC CGCTGTACTG GGAAGAGCAA GTCAAAACTA ACGCCGATGA GCTTATCGCT 
CACACCTTTG AATTTTTGAC GTACCTTATT CGCATTCAAG AAAGTGAAGA AAAACAAGCC 
GCTATTTTAG AGTGTATTGC AGAAGATCCT GCCGGTCTGT TCTATTTGTC GATACCTTTT 
ATCGAACTTA TCTTAGCCCC AAGTGAATTT AACGAAGACG GCGGCCACGA ATTACATGAC 
GATGAAGATG ATGGCACCAC GGTAGGCTTC GACAGCTGGC ACGCCAGTGA AGAGTCCCAC 
AGCCTAGGCA TTGATGACCC TCGCAGCCTA ATGGCGCTAA TTCAAGAACT GGCACCGGAA 
GTGGCGAAAT CCATCAAGAA CTTACTGCGC AATGAGAGCT CTGGCTGGGA GCAAATTATT 
TCCAAGTTCG TTAATGAGCT GGTACTGCAA GCGAAAGAGA AAAACCAAGT GGCGGACGAA 
TACGCTGAAG TTGATGATAT GTTTAGCTTT TTAGATTAA
 
Protein sequence
MTTSLIEITA QEIKQLADVE PKQASKRFEI IANTMTDAQL VEVIEHMDIV TLTQINSHHD 
ISCPSIMSEL MSPEQIRDIV CQQPLYWEEQ VKTNADELIA HTFEFLTYLI RIQESEEKQA 
AILECIAEDP AGLFYLSIPF IELILAPSEF NEDGGHELHD DEDDGTTVGF DSWHASEESH 
SLGIDDPRSL MALIQELAPE VAKSIKNLLR NESSGWEQII SKFVNELVLQ AKEKNQVADE 
YAEVDDMFSF LD