| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3015 |
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| Symbol | |
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| ID | 4019540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3620792 |
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| End bp | 3623125 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957066 |
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| Product | peptidase M4, thermolysin |
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| Protein accession | YP_564016 |
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| Protein GI | 91794365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3227] Zinc metalloprotease (elastase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTAA ATAAGAAACT GTCACTGATT TTCATTGCCA TGTCAGCGAC ATTAGGCACA
TCGGTATTTG CCGCTGATGT GGTCGATGTC GCAACCCTCA AAAGTAGCGC AGCTAGCAAT
GACTTAGTCT CTGGGCTTAA TTTAGATAAA GGCAGCCAAC TTAAAGTTGA GAAACAGCTC
AACCTAAGTA AAGGCTTGCA GAAGCAGCGT TTACAGCAGT ATTTCCATGG CGTGCCCATT
TTTGGCTTCT CTGTTGCGGC TTCGCAATCT AGCATGGGCT TTTACAGCGA CATGTCGGGC
CGTGTATTAC AGAACATTGA AAAAACCGCT GATTTTGCCA AACCTAAGCT AACAGTAGAC
CAAGCATTAG CTATTGCAGT TCGCGGTAAA TCAGACAAAA CCGTGGCTAG TGTGAAGGCT
GAAAATCAAC AAGCCAAGTT GTGGATTTAC CTTGATGATG CAGCGCAAAC TCGCCTTGTA
TACATCACCT CATTTGTCGT TTACGGTGAA CAACCAAGCC GTCCATTCAC TATTGTTGAT
GCACACTCTG GTGAAATCAT TAAGCGCTGG GAAGGCATTA ATCACGCCAC AGTAGGCACG
GGCCCTGGCG GCAACATCAA AACAGGTCAA TATGAGTACG GCGTCGATTT TTTAAACCTT
GACGTTGCAG TCAATGGTGA TACCTGCACC ATGAATTCCG CTAACGTCAA AACCGTGAAC
CTAAATGGCG CAACCTCTGG CTCTAGTGCT TTTTCTTACG TTTGCCCGCG TAACACAGTC
AAAGAAATCA ATGGTGCTTA TGCGCCTTTA AACGATGCAC ACTACTTCGG CAACGTGATT
TATAACATGT ATAGCGACTG GTACAACACA GCGCCGCTAA CCTTCCAGTT AACCATGCGG
GTTCATTACG GCAGCGGTTA TGAAAATGCC TTCTGGGATG GCAGTGCCAT GACTTTTGGT
GATGGTGCTA CACGATTCCA TCCCTTGGTG AGCTTAGATG TATCCGCCCA TGAAGTCAGC
CATGGTTTCA CTGAGCAAAA CTCAGGCTTA ATATATGCCA ACCAATCTGG AGGCATGAAC
GAAGCCTTCT CAGATATGGC TGGTGAAGCG GCTGAGTTTT ATATGCGCGG CGCTAACGAC
TGGTTAGTGG GTGCCGACAT TTTTAAAGCC AGCGGCGCAC TGCGTTACAT GGCAGATCCG
ACCTTAGATG GTAACTCAAT CGGCCATATC GACGATTATT ATGATGGTAT GAACGTTCAC
CATAGTTCAG GTGTTTTCAA TAAAGCCTTC TACACCTTAG CCAACATGCC AGGTTGGGAT
ACCCGCAGCG CATTTCAAAC TTTTGTTGTC GCAAACCAAC TCTATTGGAC TGCTAATAGC
TTATTTTGGC AGGGTGCCTG CGGCGTTAAA TCTGCGGCAA CGGATCTTGG CTTAAGTGCT
GCCGACGTGG TCACAGCCTT TGCCGTTGTG GGTATTACTC CTTGTGAAAC TCCGCCACCA
CCACCTCCAC CAGCAGCATA TAAACTGACA AACGGTACGC CAGTGACTGA CTTAGCTGGC
AACGCTGGCA ACAAGCAATA CTTCACCCTA GACGTGGCTA GTGGCGCGAC TGATTTGAGT
TTTGTTATGT CAGGTGGTAC TGGTGATGCT GACATGTATG TTAAATACGG CCAAGCCCCC
AGCTCAAGCA ACTATGATTG CCGCCCCTTC AAAAATGGCA ATACTGAAAG CTGCCCCATA
GTTCCAGCCC AAGCAGGTAC TTATTGGGTA ATGATTAATG CTTATAGTCG TTACTCTGGG
GCAAATTTAG TGGGTAGCTA TGTGGGAGAT GATGCACCAA ATCACAACCC AGCTGCTAGC
TTTGACGCAA GCTTTAACAA TGGCAATGCC AGCTTCAACA GCACAAGTAC AGACAGTGAC
GGTGAACTGG TTTCATGGAG CTGGGACTTT GGTGATGGTC AAACTGCCAC TGGCACAAAT
GTCACTCATC AATATGCACA ATCGGGTTCA TACACAGTGT CGCTGACTGT AACTGATAAC
GATGGCGCAA CTGACACTAC AGCCGCAGAG TTTGCCGTTG AAGTACCAGA AGTCGCCCTA
GACATAGCAA TAGACAGTGC TAACAAGTCA CGCCGTGGTA GCATACGGGT CGCGCTTTCT
TGGAGTGATA GTCATGCCGC TCAGTACACC ATCTACCGTG ACGGTGTTGC TGTGGGCACT
TCAAGCCGCA CATCCTTTGT TGACCGCTTC CGAGACTCAG CCGGCACAAG TTTCAACTAT
AAAGTCTGTG AAACCAACGG CCCTTGTTCA AACGAATCCA ACGTTAATTT TTAA
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| Protein sequence | MMLNKKLSLI FIAMSATLGT SVFAADVVDV ATLKSSAASN DLVSGLNLDK GSQLKVEKQL
NLSKGLQKQR LQQYFHGVPI FGFSVAASQS SMGFYSDMSG RVLQNIEKTA DFAKPKLTVD
QALAIAVRGK SDKTVASVKA ENQQAKLWIY LDDAAQTRLV YITSFVVYGE QPSRPFTIVD
AHSGEIIKRW EGINHATVGT GPGGNIKTGQ YEYGVDFLNL DVAVNGDTCT MNSANVKTVN
LNGATSGSSA FSYVCPRNTV KEINGAYAPL NDAHYFGNVI YNMYSDWYNT APLTFQLTMR
VHYGSGYENA FWDGSAMTFG DGATRFHPLV SLDVSAHEVS HGFTEQNSGL IYANQSGGMN
EAFSDMAGEA AEFYMRGAND WLVGADIFKA SGALRYMADP TLDGNSIGHI DDYYDGMNVH
HSSGVFNKAF YTLANMPGWD TRSAFQTFVV ANQLYWTANS LFWQGACGVK SAATDLGLSA
ADVVTAFAVV GITPCETPPP PPPPAAYKLT NGTPVTDLAG NAGNKQYFTL DVASGATDLS
FVMSGGTGDA DMYVKYGQAP SSSNYDCRPF KNGNTESCPI VPAQAGTYWV MINAYSRYSG
ANLVGSYVGD DAPNHNPAAS FDASFNNGNA SFNSTSTDSD GELVSWSWDF GDGQTATGTN
VTHQYAQSGS YTVSLTVTDN DGATDTTAAE FAVEVPEVAL DIAIDSANKS RRGSIRVALS
WSDSHAAQYT IYRDGVAVGT SSRTSFVDRF RDSAGTSFNY KVCETNGPCS NESNVNF
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