| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2977 |
|---|
| Symbol | |
|---|
| ID | 4019502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3563215 |
|---|
| End bp | 3564252 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637957028 |
|---|
| Product | rRNA (guanine-N(2)-)-methyltransferase |
|---|
| Protein accession | YP_563978 |
|---|
| Protein GI | 91794327 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTAGTA ATTCATCTCA AGTTATTCTT CGTAATAGTG ATTATTTTCA ACACCAAGAT
GTGCTAATCC TCAATTATGA GGCCGACACC TTGGGATTAA GCCTATTAGC CCATGCCAAG
TCAGTTACTG CACTAGCGCT TGATTTTAAT CATTATTTAC AGCTAGCAGC AAAGGAGCAG
CCGCAGCTTG CTTGTTTTTT TGGCCACACC TTACCAAGCT CTTTCGCGGG AAAAACCTTC
GATAGCGTGA TAGTTTTCTT TCCAAAGGCC AAATCCTTAG CCCCATACTT ATTTGAACTT
GCAGCGAATC ATCTCAATAT TGACGGTCAG TTGATGATAG TCGGCGACAA TAAAGGCGGT
ATAAAGTCGG TAGCTAAGCT CATTCCAGAC TGTTTTAGCG CGCCGGTAAA AAGAGACAAT
GCCAGACATT GCTTGCTTTA CACCTGCCAG CTAGAACGGC AAGGCAGAGA CTTCAAACTA
GAGAATTGGC TAAGCCAATA CAGCCTGAGC ACGCCTCAGG GTGAAATCAT CATTTGTAAT
CTGGTGGGGG TATTTAGTGA GAAACACTTA GATCTCGGCA CTGAATTACT GCTCTCTCAC
TTGCCGAAGC TTGAAGGTCG TGTGCTTGAC TTTGGTTGTG GTGCAGGGGT GATCACTGTC
GCCCTACTTA AGGCCATGCC TAAACTTGAA CTTGAATGCA TAGACATCAA TGCTATGGCA
TTAGCCTCTT GCGAATTAAC CTTACAAGCC AATAAGTTAC AAGCCAAAGT TTATCCTTCA
GATGGATTAA CCCAAGTCAC AGGCGCGTTC GATGCCATTA TTTCCAACCC GCCCTTTCAT
GATGGTCTCA CCAGCACCAC AGATATCGCC ACCCAATTTG TGGCCATGAG CGAGAAGCAG
CTTAAATCGA AGGGGATTTG GCAAATTGTC GCCAATCGCC ACTTACCCTA TGCAAGCACC
ATAGCGCAAG TGTTTGGCAA CTTTGACGTG CCCGCTGAAA ACAATAAATT TAAACTCTAC
GCCTGCCGTA AAAAATAA
|
|---|
| Protein sequence | MLSNSSQVIL RNSDYFQHQD VLILNYEADT LGLSLLAHAK SVTALALDFN HYLQLAAKEQ
PQLACFFGHT LPSSFAGKTF DSVIVFFPKA KSLAPYLFEL AANHLNIDGQ LMIVGDNKGG
IKSVAKLIPD CFSAPVKRDN ARHCLLYTCQ LERQGRDFKL ENWLSQYSLS TPQGEIIICN
LVGVFSEKHL DLGTELLLSH LPKLEGRVLD FGCGAGVITV ALLKAMPKLE LECIDINAMA
LASCELTLQA NKLQAKVYPS DGLTQVTGAF DAIISNPPFH DGLTSTTDIA TQFVAMSEKQ
LKSKGIWQIV ANRHLPYAST IAQVFGNFDV PAENNKFKLY ACRKK
|
|---|
| |