Gene Sden_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2973 
Symbol 
ID4019498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3559158 
End bp3559967 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content42% 
IMG OID637957024 
Productdeoxyribonuclease I 
Protein accessionYP_563974 
Protein GI91794323 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.576725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTCGTA AGCCAGATTC GCCTAGTATC CCCAGGCTTG TAATACTGAT TATCATCTTA 
GATTTGGACA TTCAATTGCC CCGTATTAAA TTCAAATATT TTTCTCTATT TGTAGGTGTT
TTCTGCGCCT TATTCAGCTC TGTCAGTCAA AGCACCGAGC ATGCCAGTAG TTTTAGACAA
GCCAAGAAAA TGGCCCAAGG GATTTATAGC GACTTACCGC TGGCAAGTTT TTACTGTGGC
TGCGATATCA AAATTGACGG AAAAAAATGG CAGCCACAAT TTGAGTCCTG TGGTTTTAAA
GTTCGCAAAC AAGCCAAAAG AGCGCAACGA ATTGAATGGG AGCACTTGGT CCCCGCGTGG
GAATTTGGCC ATCAAATGCA ATGCTGGCAA CAAGGTGGCC GTAAATTTTG CAGTAAAAAC
AGCCCAGAAT TTAATAAAAT GGAGGCTGAC TTACATAACT TAGTGCCCGC CATTGGTGAA
GTGAACGGCG ATCGCAGTAA CTACCGATTC AGTGAATGGA ACGGTAAAGC TAATCAGTAT
GGTCGTTGTG ATATGTTAGT GAATTTTAAA GACCGAAAAG TGCAGCCTCC TGCAAGTTCC
CGTGGTGCCA TAGCTAGAGC TTATTTTTAC ATGCAACAAC GTTATGGCTT GCGAATTTCC
AGCAGCCAAT CAAAGTTATT TTCGGCCTGG GACAAACAAT ATGCGGTCAA TAGTATAGAA
TGCAAACGTG ATAGATTAAT TGCCCAATCT CAGGGGAATC ACAATGAATT TGTTCAGAAA
TCCTGCCTCA AACTCGGCTT AATAAACTAA
 
Protein sequence
MPRKPDSPSI PRLVILIIIL DLDIQLPRIK FKYFSLFVGV FCALFSSVSQ STEHASSFRQ 
AKKMAQGIYS DLPLASFYCG CDIKIDGKKW QPQFESCGFK VRKQAKRAQR IEWEHLVPAW
EFGHQMQCWQ QGGRKFCSKN SPEFNKMEAD LHNLVPAIGE VNGDRSNYRF SEWNGKANQY
GRCDMLVNFK DRKVQPPASS RGAIARAYFY MQQRYGLRIS SSQSKLFSAW DKQYAVNSIE
CKRDRLIAQS QGNHNEFVQK SCLKLGLIN