Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2973 |
Symbol | |
ID | 4019498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3559158 |
End bp | 3559967 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637957024 |
Product | deoxyribonuclease I |
Protein accession | YP_563974 |
Protein GI | 91794323 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.576725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCTCGTA AGCCAGATTC GCCTAGTATC CCCAGGCTTG TAATACTGAT TATCATCTTA GATTTGGACA TTCAATTGCC CCGTATTAAA TTCAAATATT TTTCTCTATT TGTAGGTGTT TTCTGCGCCT TATTCAGCTC TGTCAGTCAA AGCACCGAGC ATGCCAGTAG TTTTAGACAA GCCAAGAAAA TGGCCCAAGG GATTTATAGC GACTTACCGC TGGCAAGTTT TTACTGTGGC TGCGATATCA AAATTGACGG AAAAAAATGG CAGCCACAAT TTGAGTCCTG TGGTTTTAAA GTTCGCAAAC AAGCCAAAAG AGCGCAACGA ATTGAATGGG AGCACTTGGT CCCCGCGTGG GAATTTGGCC ATCAAATGCA ATGCTGGCAA CAAGGTGGCC GTAAATTTTG CAGTAAAAAC AGCCCAGAAT TTAATAAAAT GGAGGCTGAC TTACATAACT TAGTGCCCGC CATTGGTGAA GTGAACGGCG ATCGCAGTAA CTACCGATTC AGTGAATGGA ACGGTAAAGC TAATCAGTAT GGTCGTTGTG ATATGTTAGT GAATTTTAAA GACCGAAAAG TGCAGCCTCC TGCAAGTTCC CGTGGTGCCA TAGCTAGAGC TTATTTTTAC ATGCAACAAC GTTATGGCTT GCGAATTTCC AGCAGCCAAT CAAAGTTATT TTCGGCCTGG GACAAACAAT ATGCGGTCAA TAGTATAGAA TGCAAACGTG ATAGATTAAT TGCCCAATCT CAGGGGAATC ACAATGAATT TGTTCAGAAA TCCTGCCTCA AACTCGGCTT AATAAACTAA
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Protein sequence | MPRKPDSPSI PRLVILIIIL DLDIQLPRIK FKYFSLFVGV FCALFSSVSQ STEHASSFRQ AKKMAQGIYS DLPLASFYCG CDIKIDGKKW QPQFESCGFK VRKQAKRAQR IEWEHLVPAW EFGHQMQCWQ QGGRKFCSKN SPEFNKMEAD LHNLVPAIGE VNGDRSNYRF SEWNGKANQY GRCDMLVNFK DRKVQPPASS RGAIARAYFY MQQRYGLRIS SSQSKLFSAW DKQYAVNSIE CKRDRLIAQS QGNHNEFVQK SCLKLGLIN
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