| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2970 |
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| Symbol | |
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| ID | 4019495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3555499 |
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| End bp | 3556836 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637957021 |
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| Product | sigma-54 factor, interaction region |
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| Protein accession | YP_563971 |
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| Protein GI | 91794320 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGAA AGGATGTGAT CATGGAACCA TTATTGATGG CTGGTTTTCA GTGTGATGAA
CTCAATGAAG TGCTTTCTCG CCAAGGATAC CAAGCCTTTT ACATTAAAAA TAACGATTAT
CAAGCAATGC CTTTTAACTG TCATTTGTGC CTAGTTGATC TTAGAGATGA AAGCTTTATG
GCTGAAGCGA ATTACTTGGT CCGAGAGCTA GATTCCTGTG TGCATGTGAT AGTTCTCATC
AACAAGTCAC AATTGAATTC GACAGAAATC ACCACATTTA TTGCGCAGTT TGCTTGGGAT
TATTGCACCA GTCCCATTCA CCCCGAAAGG CTCGAAAAAT GTTTAGGTCA CGGAATAGGT
CTAGCGAGAC TTAAGCGTCA ATGTGTGCTG AAAGAGGTGA TCCCTCACTC CGATGACGAA
AGCACCCATT CTTCTCTTGT CATGCAACAA TTGTTTAAAC AAATTGCTCG GGTAGCACCC
ACGGATATCC CAGTGTTAAT TCGTGGAGAA AGCGGCACGG GAAAAGAGCT TGCGGCGAAG
AAGCTGCATC AATTATCCAG TCGTAGCCAA GGGCCATTTA TTGCAGTTAA CTGTGGGGCA
ATGGCTGCAG GCTTAGTTCA ATCAGAGTTG TTTGGTCATG AAAAAGGAGC ATTTACTGGG
GCGTCCAGTG CCCGAAAAGG TAAAATAGCC CTCGCCGATG GTGGCAGTTT ATTCTTGGAC
GAAATCGGTG ATTTACCCTT AGAGTTGCAA GTTAATTTAT TGCGTTTCTT ACAAGAAGGG
GTGTTTGATA CTCTGGGGGG GAATGGCGCT ATTTCATCGG ATGTACGCAT TATTGCTGCG
ACTCATGTCG ATCTAGAACA GGCCATTGAT GAAGGACAAT TTAGGTTAGA TCTTTATTAT
CGTTTAAATG GTATCACCTT AGAAACACCG CCGCTAAGAG AAAGGCGAGA TGATATCTTA
CCCTTAGCAA AATATTTTAT TCAATCTTAC TTATCGGAAT ACGACCTCAC CAGTAAACAA
TTAACCCCAG ACGCTAAACA ATCCTTATTG AATTATTCTT GGCCGGGGAA TGTCCGCGAG
CTGATAAATA GGGTCCGTCG TGCAGTGGTG TTAAGTGATG GGGATAAGAT TAACGCCTTT
AATTTAGAAC TCGCCGATAA ACGTGAGGAG ACACAAGATT TTATGTCGTT AAAATGCCTT
AAAGATGACG CAGAAAAACA GGCGCTTCAG TCGGCTATTC TTATTTCTGG TGGCCAGGCC
GATGTTGTGG CGTGTCAATT ACAAATTTCA AGAGCGACCT TATACCGACT GATGGATAAA
CACGGTTTGC AACTTTGA
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| Protein sequence | MLRKDVIMEP LLMAGFQCDE LNEVLSRQGY QAFYIKNNDY QAMPFNCHLC LVDLRDESFM
AEANYLVREL DSCVHVIVLI NKSQLNSTEI TTFIAQFAWD YCTSPIHPER LEKCLGHGIG
LARLKRQCVL KEVIPHSDDE STHSSLVMQQ LFKQIARVAP TDIPVLIRGE SGTGKELAAK
KLHQLSSRSQ GPFIAVNCGA MAAGLVQSEL FGHEKGAFTG ASSARKGKIA LADGGSLFLD
EIGDLPLELQ VNLLRFLQEG VFDTLGGNGA ISSDVRIIAA THVDLEQAID EGQFRLDLYY
RLNGITLETP PLRERRDDIL PLAKYFIQSY LSEYDLTSKQ LTPDAKQSLL NYSWPGNVRE
LINRVRRAVV LSDGDKINAF NLELADKREE TQDFMSLKCL KDDAEKQALQ SAILISGGQA
DVVACQLQIS RATLYRLMDK HGLQL
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