Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2956 |
Symbol | |
ID | 4019481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3536804 |
End bp | 3537760 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637957007 |
Product | glycine cleavage T protein (aminomethyl transferase) |
Protein accession | YP_563957 |
Protein GI | 91794306 |
COG category | [R] General function prediction only |
COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTTT CCACTCAGTC TATGACTGAT TTTTATCCCG TATCCGAAAT CAATGCCGCA CGCTTATCCC ACTTCGGAAT GATTGAAATC ACAGGTGAAC AGGCCAAAAC CTTTATCAAT GGTCAAGTCA CTACCGATAT AATCAGCATG ACAGACGAGG AATGGCGCTG GGGAGCTCAC TGCGACCCTA AAGGTAAGAT GATAGCCAGT TTTAGGATTT TTCTCCTAGG AGAGCGCTTA TTGATGCTTA TGCCTAAGTC GACACTAGCC TTAGACTTAG CACAATTAAA AAAATACGCC GTATTTAGCA AGGCTGAACT CACAGATGTA AGTGATAGCT GGGCTATTTT AGGTCTTTGG GGGGAAAAAT CAGTTGATCT GATGACTCAG CACTTTGGTG AACTCACCCA AGGGTTAACC GCCACAGAGC AAGGCGCCAT CTTAAAGGAC AATTTTGGTT TTATGGCTAT TCTGCCCCAA GAGCAGGCTA ACATCTTTAT CGAGCAGGCA AAGCTTGAGC TTGTGGCTCA TAAGGCATGG CAAGCATTAG AAATCGCAGC TGGCTATCCC AACATTGACA GTCAACACAG TGGTCAATAC GTACCGCAAA TGTGTAATCT TCAGGCCGTC AATGGCATTA GCTTCACCAA AGGCTGCTAC ATGGGCCAAG AGACCATTGC TAGGATGAAA TACCGTGGCG GCAATAAACG CGCCCTATAT ATACTTGAAG GCACTACTCA GCGAACCCTG AGCACTGAGA GCCAAGTCGA GATCCAACTT GAAGGCGGCT ACCGCAAAGT CGGTAATGTC ATCGAAGTGG TGCAGGAAGG TGAAAGAGTA TTAATGACCG CTGTGCTCGC TAACGATACT GAAGCAGATG CCGTGCTGCG AATGGCTGAA GATGAAAGCT CAAGCTTAGC CATCAAAGCC CTGCCTTACT CTTTGACCGA GGAATAG
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Protein sequence | MSVSTQSMTD FYPVSEINAA RLSHFGMIEI TGEQAKTFIN GQVTTDIISM TDEEWRWGAH CDPKGKMIAS FRIFLLGERL LMLMPKSTLA LDLAQLKKYA VFSKAELTDV SDSWAILGLW GEKSVDLMTQ HFGELTQGLT ATEQGAILKD NFGFMAILPQ EQANIFIEQA KLELVAHKAW QALEIAAGYP NIDSQHSGQY VPQMCNLQAV NGISFTKGCY MGQETIARMK YRGGNKRALY ILEGTTQRTL STESQVEIQL EGGYRKVGNV IEVVQEGERV LMTAVLANDT EADAVLRMAE DESSSLAIKA LPYSLTEE
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